Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC092648.1-201ENST00000425870 423 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RPS15AP10-201ENST00000432472 382 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 GDI2P2-201ENST00000445131 608 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 MTATP6P14-201ENST00000455189 673 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RPL31P58-201ENST00000469001 379 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RPL30P12-201ENST00000474666 353 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC009646.1-201ENST00000510455 318 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RNU6-991P-201ENST00000516168 107 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 SNORA43.2-201ENST00000516652 128 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 BNIP3P6-201ENST00000549284 499 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC068338.1-201ENST00000565567 176 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC018645.2-201ENST00000609151 472 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AL512598.1-201ENST00000610158 273 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 RMST_6.1-201ENST00000611980 203 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 MIR6715A-201ENST00000615929 79 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC099842.1-201ENST00000619919 596 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AL049777.1-201ENST00000622740 518 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 AC103706.2-201ENST00000638080 240 ntBASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
HHLA3Q9XRX5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC091812.1-201ENST00000432235 1948 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 RNU6-157P-201ENST00000383957 107 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MIR578-201ENST00000384828 96 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MIR122-201ENST00000385044 85 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MIR764-201ENST00000390811 85 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 RNA5SP213-201ENST00000391031 106 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 RNU6-174P-201ENST00000410406 106 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 RPL30P13-201ENST00000418873 348 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MTCO2P21-201ENST00000419780 677 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MTND1P20-201ENST00000430341 950 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 snoU109.3-201ENST00000459477 145 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC022616.6-201ENST00000520479 119 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MIR3169-201ENST00000578032 83 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 MIR4298-201ENST00000584380 73 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AC112187.2-201ENST00000604345 283 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AL158032.1-201ENST00000605401 106 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 AP002360.4-201ENST00000606980 481 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 OR4G3P-201ENST00000633500 913 ntBASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HHLA3Q9XRX5 CBX3P1-201ENST00000325243 554 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RNU6-661P-201ENST00000362409 107 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 SNORD56.1-201ENST00000362913 68 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RNU6-457P-201ENST00000363999 107 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RNU4-13P-201ENST00000364019 141 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 Y_RNA.302-201ENST00000364997 102 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RNU6-203P-201ENST00000384038 104 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RPS3AP36-201ENST00000398190 775 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL355143.1-201ENST00000407101 841 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AC114491.1-201ENST00000416095 246 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RPS15AP12-201ENST00000419498 388 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL035666.1-201ENST00000446195 348 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 MTND1P12-201ENST00000455231 147 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 RPL30P1-201ENST00000488676 339 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 SNORA31.17-201ENST00000516953 127 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL161670.1-201ENST00000554348 137 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 MIR4303-201ENST00000581299 66 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 MIR548AC-201ENST00000585049 88 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL158050.2-201ENST00000605336 568 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AC121334.2-201ENST00000605387 271 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 AL359547.2-201ENST00000615810 418 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 U6.42-201ENST00000618440 107 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 SCARNA4-202ENST00000625402 129 ntBASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms