Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HSPE1P11-201ENST00000339579 310 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-288P-201ENST00000363690 104 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-534P-201ENST00000364877 106 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.296-201ENST00000364930 108 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNA5SP37-201ENST00000365420 130 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-483P-201ENST00000384088 108 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-220P-201ENST00000390919 107 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-876P-201ENST00000391295 104 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 GSTA9P-201ENST00000406231 611 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU4-55P-201ENST00000410731 137 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 HMGB3P2-201ENST00000411913 584 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 MTND4P28-201ENST00000426217 387 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RPL31P35-201ENST00000431058 377 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 MTND3P21-201ENST00000433774 331 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AL161651.1-201ENST00000440882 223 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 PSPHP1-201ENST00000450062 261 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-875P-201ENST00000516488 106 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-677P-201ENST00000516914 101 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-1220P-201ENST00000517126 108 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AL158827.2-201ENST00000602494 330 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 RNU6-87P-201ENST00000607561 108 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AL691447.3-201ENST00000635020 330 ntBASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.61-201ENST00000362835 102 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 RNY4P14-201ENST00000363656 96 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.295-201ENST00000364918 102 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MIR301A-201ENST00000385261 86 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 SNORA48.3-201ENST00000391081 134 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 FGF7P8-201ENST00000402994 292 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MIR1289-2-201ENST00000408360 111 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MTCO1P20-201ENST00000425366 358 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC104850.1-201ENST00000435940 476 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 RPS15AP9-201ENST00000439856 381 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MTCO2P29-201ENST00000465212 189 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 UBL5P3-201ENST00000475112 231 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 RPS29P25-201ENST00000481709 171 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC009902.1-201ENST00000519351 183 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MTND1P35-201ENST00000526739 508 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 uc_338.14-201ENST00000613162 166 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC025253.1-201ENST00000613623 543 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC002553.4-201ENST00000616896 331 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC007742.2-201ENST00000618226 398 ntBASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP2Q9UDT6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.9-201ENST00000362354 101 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.159-201ENST00000363674 87 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 RNU4-1-201ENST00000363925 141 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 U3.40-201ENST00000408706 208 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 RPS15AP12-201ENST00000419498 388 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 MTND1P14-201ENST00000427400 950 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 MTCO2P11-201ENST00000431069 680 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AL591212.2-201ENST00000433923 257 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC098614.3-201ENST00000438957 440 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC022364.2-201ENST00000457963 554 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 snoU109.1-201ENST00000459339 135 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 RPS27P21-201ENST00000486977 252 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 RNU6-358P-201ENST00000516564 75 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 RNA5SP337-201ENST00000517007 109 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 HSPE1P18-201ENST00000517602 280 ntBASIC2.47□□□□□ -2.01
CLIP2Q9UDT6 AP001893.2-201ENST00000526949 202 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms