Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU2-53P-201ENST00000516257 147 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-1315P-201ENST00000517187 99 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC026616.1-201ENST00000523157 525 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AP003049.1-201ENST00000529418 457 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RAB11AP2-201ENST00000545905 639 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC136618.2-201ENST00000575091 400 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC126365.2-201ENST00000580630 379 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MIR4293-201ENST00000584305 78 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 Z82243.1-201ENST00000609432 473 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC092574.1-201ENST00000609771 420 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 uc_338.15-201ENST00000615470 191 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC090517.3-201ENST00000625170 141 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MTND5P9-201ENST00000503854 1755 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 ZNF29P-201ENST00000225587 168 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 snoU2_19.1-201ENST00000362361 80 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MIR320C1-201ENST00000408566 88 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP501-201ENST00000410990 112 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC083875.1-201ENST00000419509 405 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP269-201ENST00000459032 137 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 MTND2P33-201ENST00000506452 1031 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-667P-201ENST00000517186 102 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 OR8K2P-201ENST00000524645 927 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 COPS8P3-201ENST00000526024 482 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC093012.1-202ENST00000549403 582 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC005776.1-201ENST00000603164 290 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC006270.3-201ENST00000605967 1036 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC124016.2-201ENST00000610058 665 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC006927.2-201ENST00000639256 389 ntBASIC0.76□□□□□ -2.29
KIAA1549Q9HCM3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC104563.1-201ENST00000476147 376 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 RPS23P4-201ENST00000487908 423 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC114801.2-201ENST00000503825 781 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AP003392.2-201ENST00000527269 208 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 RPL21P5-201ENST00000554662 472 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 MIR3937-201ENST00000580135 106 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AC021171.1-201ENST00000603137 706 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AL355472.4-201ENST00000610233 626 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 AL132822.1-201ENST00000617063 513 ntBASIC0.75□□□□□ -2.29
KIAA1549Q9HCM3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-853P-201ENST00000364306 107 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-609P-201ENST00000365459 107 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 SNORA70.7-201ENST00000384159 133 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RPL37P10-201ENST00000412884 288 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL953862.1-201ENST00000423016 168 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 FTH1P12-201ENST00000432137 551 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 TIMM9P1-201ENST00000436122 256 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL096829.2-201ENST00000446582 742 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AC093899.1-201ENST00000457984 376 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RPL30P6-201ENST00000475925 342 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 CYCSP23-201ENST00000519781 313 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RRN3P3-201ENST00000549207 578 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-88P-201ENST00000606801 100 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AP000943.4-201ENST00000622912 357 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 SNORD33-201ENST00000362761 85 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-188P-201ENST00000364207 107 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNY1-201ENST00000364228 113 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL133475.1-201ENST00000404414 305 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP100-201ENST00000410903 110 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNA5SP59-201ENST00000410922 110 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL627311.1-201ENST00000431514 115 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AL035666.1-201ENST00000446195 348 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AC005908.1-201ENST00000468701 347 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 MTND1P3-201ENST00000484956 952 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 HMGB1P28-201ENST00000507778 552 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 RNU6-902P-201ENST00000517212 91 ntBASIC0.74□□□□□ -2.29
KIAA1549Q9HCM3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms