Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSL2Q9HCI7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RNU1-35P-201ENST00000362782 153 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 MRPL35P1-201ENST00000404272 572 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 MIR1298-201ENST00000408783 112 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 SNORD12B-201ENST00000410433 91 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.793-201ENST00000411222 111 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RPL37P4-201ENST00000448908 268 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 SSXP4-201ENST00000451349 245 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 AC078918.1-201ENST00000498515 228 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 AC026402.1-201ENST00000513642 170 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RNU7-110P-201ENST00000516891 62 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 MIR4643-201ENST00000577473 78 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 MIR4286-201ENST00000580651 93 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 FTX_3.1-201ENST00000610451 147 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 AC004792.1-201ENST00000614523 137 ntBASIC3.37□□□□□ -1.87
MSL2Q9HCI7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSL2Q9HCI7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.29-201ENST00000362570 113 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.200-201ENST00000364018 102 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RNU6-318P-201ENST00000384283 103 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 FTH1P15-201ENST00000406984 280 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RNU6-1001P-201ENST00000411265 100 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RPS29P7-201ENST00000439662 171 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AC098831.1-201ENST00000440661 216 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 GPM6BP3-201ENST00000442797 145 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AC016700.2-201ENST00000446011 156 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RPL23AP3-201ENST00000453844 468 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RPL30P12-201ENST00000474666 353 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RPL31P61-201ENST00000496160 376 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RNU6-1012P-201ENST00000516606 109 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RNA5SP143-201ENST00000516936 115 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 HSPE1P4-201ENST00000550617 308 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 RPL23AP88-201ENST00000605759 454 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 AC005296.1-201ENST00000616145 209 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 SCARNA4-201ENST00000629045 128 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 U2.22-201ENST00000636441 106 ntBASIC3.36□□□□□ -1.87
MSL2Q9HCI7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.36□□□□□ -1.87
MSL2Q9HCI7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNA5SP97-201ENST00000365006 84 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNA5SP167-201ENST00000365461 116 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNU6-1286P-201ENST00000383871 107 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNU1-73P-201ENST00000383971 164 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 SNORA29-201ENST00000384183 140 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RNU6-21P-201ENST00000384710 107 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 Y_RNA.581-201ENST00000391017 97 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 SNORA57.1-201ENST00000391227 145 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 HMGB1P37-201ENST00000439613 609 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 HSPE1P25-201ENST00000455484 251 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 HMGN2P7-201ENST00000456186 273 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC019159.1-201ENST00000605094 187 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 BX284668.6-201ENST00000606899 438 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 MIR486-1-201ENST00000612171 68 ntBASIC3.35□□□□□ -1.87
MSL2Q9HCI7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MSL2Q9HCI7 AC024581.2-201ENST00000619986 252 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms