Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC087241.4-201ENST00000612441 480 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC244517.12-201ENST00000623581 663 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 Z69720.2-201ENST00000624755 279 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC243829.7-201ENST00000633081 225 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
UBQLN3Q9H347 OR56A5-201ENST00000340110 738 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 RNU6-266P-201ENST00000364225 107 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 Y_RNA.399-201ENST00000383955 105 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 SNORD116-4-201ENST00000384733 96 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 MIR27B-201ENST00000385129 97 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 TIMM9P3-201ENST00000428659 274 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AL591043.1-201ENST00000432461 424 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 RNU7-167P-201ENST00000459160 62 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AC073901.1-201ENST00000462471 408 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 Y_RNA.693-201ENST00000516641 110 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 SNORA31.23-201ENST00000517219 133 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 CKS1BP7-201ENST00000522230 235 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AF250324.2-201ENST00000608299 610 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AC092954.2-201ENST00000609103 430 ntBASIC2.33□□□□□ -2.04
UBQLN3Q9H347 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
UBQLN3Q9H347 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNU4-66P-201ENST00000365199 138 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNA5SP219-201ENST00000390940 113 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 CKS1BP2-201ENST00000497342 240 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 CCDC34P1-201ENST00000507441 517 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC079140.5-201ENST00000507882 310 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 Y_RNA.655-201ENST00000515919 96 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNU6-377P-201ENST00000515965 102 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNU6-1038P-201ENST00000516516 104 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 SNORA25.17-201ENST00000517184 124 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC023050.3-201ENST00000541142 333 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AL133241.1-201ENST00000556832 487 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 MTCO3P23-201ENST00000561363 289 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC123912.5-201ENST00000605470 343 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC004492.1-201ENST00000607036 742 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC104237.2-201ENST00000612456 443 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 AC097372.5-201ENST00000623665 376 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 HAUS6P2-201ENST00000433254 2404 ntBASIC2.32□□□□□ -2.04
UBQLN3Q9H347 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBQLN3Q9H347 RNU4-82P-201ENST00000362443 140 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 RNU6-483P-201ENST00000384088 108 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL590002.1-201ENST00000406554 418 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 RNU2-63P-201ENST00000410792 194 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC003685.2-201ENST00000422795 395 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 EIF4EP4-201ENST00000424916 578 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 MTCO3P38-201ENST00000468910 766 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AP001025.1-201ENST00000486139 332 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC018437.1-201ENST00000492214 406 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC019235.1-201ENST00000503847 207 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC091435.1-201ENST00000505442 584 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 MTCYBP40-201ENST00000509390 1135 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 RNU6-1281P-201ENST00000516223 105 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 RNU6-835P-201ENST00000516974 104 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC069113.1-201ENST00000517763 267 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC136619.2-201ENST00000563361 631 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 HMGB1P33-201ENST00000563485 527 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 MIR4424-201ENST00000585257 86 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC025165.5-201ENST00000602802 578 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC073410.2-201ENST00000603240 332 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 AC024581.2-201ENST00000619986 252 ntBASIC2.31□□□□□ -2.04
UBQLN3Q9H347 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms