| CLUAP1 | Q96AJ1 | AL117339.2-201 | ENST00000430475 | 180 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL135923.2-201 | ENST00000435444 | 501 nt | TSL 2 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPS15AP7-201 | ENST00000439294 | 405 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | Z98949.2-201 | ENST00000440996 | 144 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | BTF3L4P4-201 | ENST00000506381 | 449 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-388P-201 | ENST00000517012 | 105 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-389P-201 | ENST00000517048 | 105 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | IGKV2-23-201 | ENST00000518729 | 323 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | OOSP2-203 | ENST00000532905 | 496 nt | APPRIS ALT2 TSL 3 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC024220.1-201 | ENST00000603675 | 484 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC240442.1-201 | ENST00000616055 | 283 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR6500-201 | ENST00000622700 | 86 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNA5SP196-201 | ENST00000625967 | 102 nt | BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PRPSAP2-229 | ENST00000628609 | 192 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | DST-201 | ENST00000244364 | 16742 nt | TSL 1 (best) BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC110597.3-202 | ENST00000583493 | 3289 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | TECRL-202 | ENST00000507440 | 2876 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | N4BP2L2-205 | ENST00000446957 | 2071 nt | TSL 5 BASIC | 5 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MBD5-202 | ENST00000407073 | 9512 nt | TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | UFM1-201 | ENST00000239878 | 3138 nt | APPRIS P1 TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CSRNP3-202 | ENST00000342316 | 11684 nt | APPRIS P1 TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LTN1-207 | ENST00000614971 | 7756 nt | TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR335-201 | ENST00000362173 | 94 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.319-201 | ENST00000365138 | 92 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-19P-201 | ENST00000384718 | 107 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CYCSP48-201 | ENST00000417124 | 323 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC010891.1-201 | ENST00000449963 | 448 nt | TSL 2 BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC010099.1-201 | ENST00000455434 | 375 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNA5SP54-201 | ENST00000516951 | 92 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AP000867.2-201 | ENST00000532468 | 320 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR486-1-201 | ENST00000612171 | 68 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RBBP8P1-201 | ENST00000449447 | 1844 nt | BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | DNAH12-202 | ENST00000351747 | 9542 nt | TSL 5 BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | ZNF415-207 | ENST00000595193 | 2479 nt | TSL 1 (best) BASIC | 4.99 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PHF20L1-210 | ENST00000395390 | 5900 nt | TSL 5 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | CNGA1-203 | ENST00000420489 | 2746 nt | APPRIS P3 TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | TMEM38B-201 | ENST00000374688 | 3956 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AKT3-201 | ENST00000263826 | 7081 nt | APPRIS P1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-1285P-201 | ENST00000363480 | 105 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNA5SP322-201 | ENST00000363617 | 119 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU1-89P-201 | ENST00000384592 | 164 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR548H3-201 | ENST00000408771 | 118 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL500522.2-201 | ENST00000448562 | 343 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | U8.22-201 | ENST00000459141 | 133 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SNRPGP7-201 | ENST00000469016 | 106 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AP000870.1-201 | ENST00000472927 | 406 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | LINC02233-201 | ENST00000513718 | 358 nt | TSL 3 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC087341.1-201 | ENST00000521490 | 491 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC120057.2-201 | ENST00000571520 | 271 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | ZYXP1-201 | ENST00000617638 | 118 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC141273.2-201 | ENST00000618989 | 130 nt | BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MAGI2-AS3-224 | ENST00000619135 | 205 nt | TSL 5 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | STON1-GTF2A1L-203 | ENST00000402114 | 3790 nt | TSL 2 BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SYTL2-203 | ENST00000359152 | 4123 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.98 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MFN1-201 | ENST00000263969 | 2754 nt | APPRIS P1 TSL 1 (best) BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC242426.3-202 | ENST00000607149 | 2397 nt | TSL 5 BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-222P-201 | ENST00000362438 | 107 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-1093P-201 | ENST00000391194 | 107 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6ATAC23P-201 | ENST00000408448 | 123 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-121P-201 | ENST00000410525 | 99 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU2-38P-201 | ENST00000410856 | 79 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RN7SKP58-201 | ENST00000411010 | 305 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AFDN-AS1-202 | ENST00000417244 | 182 nt | TSL 2 BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL591419.1-201 | ENST00000427423 | 339 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | SSXP4-201 | ENST00000451349 | 245 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AKIRIN2P1-201 | ENST00000505898 | 352 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | RNU6-570P-201 | ENST00000517051 | 105 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | MIR3136-201 | ENST00000583498 | 78 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | DMD-230 | ENST00000620040 | 13746 nt | APPRIS ALT2 TSL 5 BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PPIP5K2-217 | ENST00000627916 | 6010 nt | APPRIS ALT2 TSL 5 BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | THEMIS-202 | ENST00000368250 | 4101 nt | APPRIS P3 TSL 5 BASIC | 4.97 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | PCDH15-218 | ENST00000437009 | 6804 nt | TSL 5 BASIC | 4.96 | □□□□□ -1.61 | | |
| CLUAP1 | Q96AJ1 | BRCA2-206 | ENST00000544455 | 10984 nt | APPRIS P1 TSL 1 (best) BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | CNOT4-202 | ENST00000356162 | 2594 nt | TSL 5 BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | CCDC178-205 | ENST00000406524 | 3039 nt | APPRIS ALT2 TSL 5 BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | RNU6-879P-201 | ENST00000364328 | 108 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | RNU4-56P-201 | ENST00000364700 | 142 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | U8.10-201 | ENST00000384260 | 133 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | RNU6-1203P-201 | ENST00000410703 | 110 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | RNA5SP38-201 | ENST00000410750 | 119 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AC004975.1-201 | ENST00000428733 | 208 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AC099794.1-201 | ENST00000450811 | 447 nt | TSL 3 BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | RN7SKP21-201 | ENST00000516503 | 220 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AC090877.1-201 | ENST00000561418 | 344 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AF001550.1-201 | ENST00000572747 | 573 nt | TSL 4 BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | MIR4659A-201 | ENST00000580269 | 81 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AC091152.3-201 | ENST00000604227 | 325 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | AC012531.5-201 | ENST00000611375 | 151 nt | BASIC | 4.96 | □□□□□ -1.62 | | |
| CLUAP1 | Q96AJ1 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 4.96 | □□□□□ -1.62 | | |