Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC026585.1-201ENST00000619582 524 ntBASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 AP003400.5-201ENST00000624827 617 ntBASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 AC005609.4-201ENST00000625071 447 ntBASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 ADAM3A-203ENST00000461344 2157 ntBASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC01555Q8NAE3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU6-384P-201ENST00000364900 104 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU4-66P-201ENST00000365199 138 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU6-45P-201ENST00000384471 107 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 SNORA40C-201ENST00000391285 128 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU2-29P-201ENST00000410423 189 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU4-46P-201ENST00000410818 138 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 FCF1P9-201ENST00000412546 282 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RPL26P27-201ENST00000414397 437 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AL121601.2-201ENST00000438019 707 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC105417.1-201ENST00000514691 285 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 RNU6-703P-201ENST00000516946 107 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AL121821.2-201ENST00000556081 394 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC090616.3-201ENST00000582184 217 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC107304.1-201ENST00000604229 296 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AC090517.2-201ENST00000614966 680 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 AP001486.3-201ENST00000615334 372 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 uc_338.34-201ENST00000617467 174 ntBASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LINC01555Q8NAE3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC135776.4-201ENST00000624300 1904 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 SNORD14B-201ENST00000364533 90 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 SNORA68.1-201ENST00000364537 132 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 MIR181A1-201ENST00000385026 110 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 RNU6-908P-201ENST00000410160 94 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 RNU6-648P-201ENST00000410190 107 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC098831.1-201ENST00000440661 216 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 RNU2-69P-201ENST00000516061 100 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 MTND4LP26-201ENST00000518144 282 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC010525.2-201ENST00000590920 195 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 MTND4P14-201ENST00000435799 1354 ntBASIC1.94□□□□□ -2.1
LINC01555Q8NAE3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AC092881.1-201ENST00000638218 2733 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AL139276.1-201ENST00000311910 1001 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.9-201ENST00000362354 101 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 RNU6-461P-201ENST00000364195 107 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.402-201ENST00000383972 102 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 RNU6-393P-201ENST00000384475 107 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AL133475.1-201ENST00000404414 305 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AL513475.1-201ENST00000406602 315 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 MIR1261-201ENST00000408659 82 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 OR9R1P-201ENST00000412200 877 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AL445687.1-201ENST00000439946 251 ntBASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01555Q8NAE3 BRK1P2-201ENST00000442875 223 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms