Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC132479.1-201ENST00000449160 144 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC109810.1-201ENST00000534066 224 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC018462.2-201ENST00000605375 395 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC068276.1-201ENST00000605793 379 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 SNORA1.1-201ENST00000364671 133 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AP003392.2-201ENST00000527269 208 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC092325.1-201ENST00000566449 554 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 MTND5P30-201ENST00000452896 1731 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC114482.1-201ENST00000418010 247 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC244098.3-201ENST00000424803 96 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 NANOGP2-201ENST00000435391 727 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SNRPEP9-201ENST00000436794 238 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC022616.8-201ENST00000533569 253 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 RN7SL660P-201ENST00000614852 299 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SEPT7P5-201ENST00000434048 306 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SEPT7P4-201ENST00000437076 306 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 U4atac.1-201ENST00000618345 95 ntBASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
VPS13CQ709C8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 SNORA31.4-201ENST00000516049 129 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 AP004371.1-201ENST00000525240 214 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 AC112187.2-201ENST00000604345 283 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 MIR4496-201ENST00000635896 61 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 MIR643-201ENST00000385267 97 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.41□□□□□ -2.47
VPS13CQ709C8 SNORA31.8-201ENST00000516327 108 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 RNA5SP137-201ENST00000516833 135 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 DUXAP1-201ENST00000556632 463 ntBASIC-0.41□□□□□ -2.47
VPS13CQ709C8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
VPS13CQ709C8 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 MIR561-201ENST00000385216 97 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 USP9YP21-201ENST00000420603 432 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.41□□□□□ -2.48
VPS13CQ709C8 FGF7P5-201ENST00000441829 291 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 HMGB1P22-201ENST00000505315 124 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 AC104408.1-201ENST00000605241 170 ntBASIC-0.41□□□□□ -2.48
VPS13CQ709C8 RPL26P27-201ENST00000414397 437 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 NCOR1P3-201ENST00000420479 303 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 GTF2IP3-201ENST00000433887 494 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13CQ709C8 RPS29P15-201ENST00000458329 171 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.42□□□□□ -2.48
VPS13CQ709C8 SUMO2P16-201ENST00000519475 264 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.42□□□□□ -2.48
VPS13CQ709C8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC112220.3-201ENST00000605502 502 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC040896.1-201ENST00000613819 479 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC096656.1-201ENST00000623826 1364 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AL590632.1-201ENST00000424289 371 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC092001.1-201ENST00000453012 261 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AL449283.1-202ENST00000418249 604 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC063976.4-201ENST00000421971 163 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 RNU6-158P-201ENST00000517104 100 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC090888.1-201ENST00000561335 1141 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AL355810.1-201ENST00000614629 552 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 uc_338.15-201ENST00000615470 191 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 AC091965.5-201ENST00000624785 342 ntBASIC-0.42□□□□□ -2.48
VPS13CQ709C8 MICF-203ENST00000432679 129 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 SCARNA17-201ENST00000516183 144 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 CYCSP27-201ENST00000527643 293 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC004584.2-201ENST00000570407 410 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 MIR3609-201ENST00000582661 80 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC092447.9-201ENST00000603395 144 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AL360219.1-201ENST00000610230 366 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC139712.2-201ENST00000424302 339 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 OR51AB1P-201ENST00000429046 620 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 RAD1P2-201ENST00000446414 663 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AL355816.1-201ENST00000607951 118 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC092447.10-201ENST00000620607 1652 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms