Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC022880.1-201ENST00000534017 973 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 AC016957.1-201ENST00000534895 309 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 MIR5583-1-201ENST00000580941 59 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 AL121917.1-203ENST00000605534 577 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 RNU6-6P-201ENST00000606623 107 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 AC092608.2-201ENST00000624427 218 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 U4.7-201ENST00000638126 106 ntBASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX30Q5VWJ9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RNU6-622P-201ENST00000384272 103 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RNU6-1215P-201ENST00000384441 102 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RNA5SP219-201ENST00000390940 113 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RPS3AP44-201ENST00000425466 790 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RPL38P4-201ENST00000502376 214 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RPL23AP94-201ENST00000512518 302 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 RNU6-189P-201ENST00000516120 101 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 SNORA31.23-201ENST00000517219 133 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 CKS1BP7-201ENST00000522230 235 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC090115.3-201ENST00000553218 849 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 OR11H5P-201ENST00000554039 926 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 PSMA3P-201ENST00000555485 635 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC090897.2-201ENST00000581715 130 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC073410.2-201ENST00000603240 332 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 DISC2.1-201ENST00000612827 205 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 YWHAEP7-203ENST00000622054 312 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC007792.1-201ENST00000623023 402 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 MIR1321-201ENST00000637766 79 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 AC068137.3-201ENST00000639191 341 ntBASIC2.76□□□□□ -1.97
SNX30Q5VWJ9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 SNORD56.1-201ENST00000362913 68 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 U3.12-201ENST00000364498 214 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 RNU6-483P-201ENST00000384088 108 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 RNU1-57P-201ENST00000384491 166 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 RNU6-1106P-201ENST00000390845 107 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 USP9YP27-201ENST00000418455 438 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AP000852.1-201ENST00000472460 573 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 RPL23AP45-201ENST00000476406 468 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 Y_RNA.654-201ENST00000497848 106 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 SMURF2P1-201ENST00000514992 481 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AC109635.3-201ENST00000529536 185 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AL138976.2-201ENST00000563989 694 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 MIR5571-201ENST00000577998 113 ntBASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 FER-210ENST00000628534 558 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNX30Q5VWJ9 AC002543.1-201ENST00000299783 1954 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 RNA5SP240-201ENST00000365355 128 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 DEFA7P-201ENST00000382676 285 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 RNU6-38P-201ENST00000384085 107 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 POLHP1-201ENST00000411806 470 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 SNORD56-201ENST00000413522 71 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 RNU6-333P-201ENST00000459117 107 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 RPL21P99-201ENST00000480369 423 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 CCDC34P1-201ENST00000507441 517 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 SNORA25.11-201ENST00000515935 105 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 COPS8P3-201ENST00000526024 482 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 VN1R80P-201ENST00000597126 338 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 APOOP1-201ENST00000604695 592 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AF250324.2-201ENST00000608299 610 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 MIR6817-201ENST00000615588 66 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 MIR5739-201ENST00000619803 80 ntBASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SNX30Q5VWJ9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms