Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNORD114-7-201ENST00000362520 77 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNORD115-13-201ENST00000363358 82 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNORD115-16-201ENST00000363887 82 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 RNU4-36P-201ENST00000364294 144 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNORD115-1-201ENST00000364961 82 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNORA26-201ENST00000391286 122 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC007256.1-201ENST00000392253 2765 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC004866.1-201ENST00000411748 78 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AL365496.1-201ENST00000426885 215 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 AL450023.3-201ENST00000440592 271 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 H2AFZP5-201ENST00000446960 382 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC090525.1-201ENST00000479116 478 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC011406.1-201ENST00000512440 370 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC007751.1-201ENST00000529260 376 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VARS2Q5ST30 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
VARS2Q5ST30 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VARS2Q5ST30 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 AC104260.2-201ENST00000623551 3497 ntBASIC5.27□□□□□ -1.57
VARS2Q5ST30 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 RNA5SP479-201ENST00000364858 117 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 Y_RNA.344-201ENST00000365381 112 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 SNORD116-13-201ENST00000384408 92 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL117342.1-201ENST00000404861 406 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 U3.32-201ENST00000408116 212 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 RNU6-402P-201ENST00000410678 103 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL591623.2-201ENST00000449978 222 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL691482.1-201ENST00000453255 87 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 RPL23AP56-201ENST00000460778 453 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 RNU7-61P-201ENST00000515897 61 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 AL162713.1-201ENST00000604480 262 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AC093732.2-201ENST00000607950 274 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AC074140.1-201ENST00000621617 208 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AC019206.1-201ENST00000621938 425 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 AC112484.5-201ENST00000624189 228 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 MAPK10-263ENST00000641052 4307 ntBASIC5.26□□□□□ -1.57
VARS2Q5ST30 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VARS2Q5ST30 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VARS2Q5ST30 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 RNU1-133P-201ENST00000364867 167 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 RNU6-487P-201ENST00000365430 104 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 MIR889-201ENST00000401280 79 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AC099336.2-201ENST00000422457 254 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AC099560.2-201ENST00000457554 255 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 ENPP7P11-201ENST00000505915 627 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 RNA5SP392-201ENST00000516905 112 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 RNA5SP291-201ENST00000517222 105 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 IGKV1-32-201ENST00000519290 311 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AP001880.2-201ENST00000538233 448 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AL121603.1-201ENST00000553815 142 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 U7.3-201ENST00000616123 62 ntBASIC5.25□□□□□ -1.57
VARS2Q5ST30 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VARS2Q5ST30 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
VARS2Q5ST30 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VARS2Q5ST30 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 Y_RNA.124-201ENST00000363339 93 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms