Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.22□□□□□ -1.89
RHBDL3P58872 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.22□□□□□ -1.89
RHBDL3P58872 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.22□□□□□ -1.89
RHBDL3P58872 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.22□□□□□ -1.89
RHBDL3P58872 RNU6-333P-201ENST00000459117 107 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 RPL21P99-201ENST00000480369 423 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AC140059.1-201ENST00000489238 361 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 CCDC34P1-201ENST00000507441 517 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 SNORA14.1-201ENST00000516113 141 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AC109635.3-201ENST00000529536 185 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
RHBDL3P58872 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RHBDL3P58872 AL138976.2-201ENST00000563989 694 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.22□□□□□ -1.89
RHBDL3P58872 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 BNIP3P16-201ENST00000589779 534 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 VN1R80P-201ENST00000597126 338 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RHBDL3P58872 U4atac.1-201ENST00000618345 95 ntBASIC3.22□□□□□ -1.89
RHBDL3P58872 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RHBDL3P58872 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RHBDL3P58872 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.21□□□□□ -1.9
RHBDL3P58872 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RHBDL3P58872 SNORA67.4-201ENST00000384688 142 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.21□□□□□ -1.9
RHBDL3P58872 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.21□□□□□ -1.9
RHBDL3P58872 USP9YP27-201ENST00000418455 438 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AL139413.1-201ENST00000421309 217 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 RPL9P33-201ENST00000484311 566 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC090096.1-201ENST00000489168 390 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 RNU2-53P-201ENST00000516257 147 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC115990.1-201ENST00000526957 301 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.21□□□□□ -1.9
RHBDL3P58872 AC016957.1-201ENST00000534895 309 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC092747.3-201ENST00000603769 301 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.21□□□□□ -1.9
RHBDL3P58872 FER-210ENST00000628534 558 ntTSL 5 BASIC3.21□□□□□ -1.9
RHBDL3P58872 IGHVIII-44-202ENST00000636235 289 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 FO624990.1-201ENST00000636373 85 ntBASIC3.21□□□□□ -1.9
RHBDL3P58872 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RHBDL3P58872 Y_RNA.3-201ENST00000362331 103 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 RNU6-1210P-201ENST00000363775 107 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RHBDL3P58872 Y_RNA.402-201ENST00000383972 102 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 RNU6-483P-201ENST00000384088 108 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 RNU6-1222P-201ENST00000384615 107 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 CYCSP48-201ENST00000417124 323 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDL3P58872 AL031274.1-201ENST00000450334 232 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AC013470.1-201ENST00000453438 462 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 snoU13.14-201ENST00000459372 104 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDL3P58872 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.2□□□□□ -1.9
RHBDL3P58872 AC087854.1-201ENST00000519706 414 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDL3P58872 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.2□□□□□ -1.9
RHBDL3P58872 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.2□□□□□ -1.9
RHBDL3P58872 RPL30P11-203ENST00000598995 310 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AL138963.2-201ENST00000605137 226 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 RNU6-85P-201ENST00000605989 107 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 MIR6817-201ENST00000615588 66 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.2□□□□□ -1.9
RHBDL3P58872 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.2□□□□□ -1.9
RHBDL3P58872 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RHBDL3P58872 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDL3P58872 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDL3P58872 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDL3P58872 RNU6-212P-201ENST00000362642 104 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 Y_RNA.231-201ENST00000364358 102 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 RNA5SP125-201ENST00000364843 120 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 RNU6-1072P-201ENST00000384703 107 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 Y_RNA.573-201ENST00000384763 105 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 RNU6-443P-201ENST00000384780 107 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDL3P58872 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDL3P58872 RPL39P29-201ENST00000447779 157 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 MTND3P16-201ENST00000452205 344 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 RNU6-1208P-201ENST00000459588 107 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDL3P58872 AF213884.2-201ENST00000510417 903 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 RNA5SP282-201ENST00000516355 108 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDL3P58872 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDL3P58872 AC123912.5-201ENST00000605470 343 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 AL359198.2-201ENST00000611836 194 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 HMGB1P24-202ENST00000615653 685 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDL3P58872 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDL3P58872 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDL3P58872 OR4G1P-203ENST00000641984 1631 ntBASIC3.19□□□□□ -1.9
RHBDL3P58872 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDL3P58872 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDL3P58872 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.18□□□□□ -1.9
RHBDL3P58872 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDL3P58872 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms