Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC010378.1-201ENST00000619270 362 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AL136221.1-201ENST00000621449 509 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
TM4SF4P48230 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TM4SF4P48230 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TM4SF4P48230 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.27□□□□□ -1.89
TM4SF4P48230 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TM4SF4P48230 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.26□□□□□ -1.89
TM4SF4P48230 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AL359854.1-201ENST00000614203 1594 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TM4SF4P48230 CBX3P1-201ENST00000325243 554 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 SNORD56.1-201ENST00000362913 68 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 BX276092.3-201ENST00000424182 230 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AL513043.1-201ENST00000439124 535 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AP001324.2-201ENST00000461163 319 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC133134.1-201ENST00000466800 359 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AC116353.2-201ENST00000505332 712 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 RNU5B-3P-201ENST00000516601 115 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.26□□□□□ -1.89
TM4SF4P48230 COPS8P3-201ENST00000526024 482 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC243972.3-201ENST00000539655 198 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AC021646.1-201ENST00000605469 484 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC024581.2-201ENST00000619986 252 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TM4SF4P48230 AC138915.1-201ENST00000565427 1685 ntBASIC3.26□□□□□ -1.89
TM4SF4P48230 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.26□□□□□ -1.89
TM4SF4P48230 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TM4SF4P48230 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TM4SF4P48230 AC131280.1-202ENST00000624067 4211 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-254P-201ENST00000363377 107 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 Y_RNA.167-201ENST00000363735 109 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-827P-201ENST00000365553 106 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-933P-201ENST00000384424 107 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-843P-201ENST00000384454 104 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 MT-TL1-201ENST00000386347 75 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AL512633.1-201ENST00000399931 655 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RN7SKP192-201ENST00000411291 327 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.25□□□□□ -1.89
TM4SF4P48230 AC009963.1-201ENST00000417265 157 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RPL21P111-201ENST00000418453 477 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 UBE2V1P4-201ENST00000425374 344 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 FABP5P14-201ENST00000437273 393 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC092185.1-201ENST00000491371 97 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RPS29P21-201ENST00000496272 170 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC096725.1-201ENST00000514266 313 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNA5SP112-201ENST00000515937 99 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RNU6-256P-201ENST00000516747 97 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 COX6CP5-201ENST00000527162 228 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC026371.1-201ENST00000551867 419 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.25□□□□□ -1.89
TM4SF4P48230 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
TM4SF4P48230 AL022345.1-201ENST00000607292 135 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC009248.2-201ENST00000619826 254 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.25□□□□□ -1.89
TM4SF4P48230 MIR7515-201ENST00000637837 67 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 RBBP8P1-201ENST00000449447 1844 ntBASIC3.25□□□□□ -1.89
TM4SF4P48230 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TM4SF4P48230 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TM4SF4P48230 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TM4SF4P48230 RNU6-1283P-201ENST00000365314 105 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF4P48230 RNU6-767P-201ENST00000384132 107 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF4P48230 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.24□□□□□ -1.89
TM4SF4P48230 VN1R36P-201ENST00000414936 291 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.24□□□□□ -1.89
TM4SF4P48230 AL139396.1-201ENST00000421137 167 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 RPL7P37-201ENST00000425095 738 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 RNU6-1037P-201ENST00000459571 107 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 RPL36AP48-201ENST00000485521 314 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 RNU6-273P-201ENST00000516937 96 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 AC118273.2-201ENST00000532092 465 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 GLYCAM1-201ENST00000546596 285 ntBASIC3.24□□□□□ -1.89
TM4SF4P48230 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.24□□□□□ -1.89
TM4SF4P48230 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.24□□□□□ -1.89
TM4SF4P48230 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
TM4SF4P48230 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF4P48230 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.24□□□□□ -1.89
TM4SF4P48230 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.24□□□□□ -1.89
TM4SF4P48230 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF4P48230 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM4SF4P48230 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TM4SF4P48230 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TM4SF4P48230 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF4P48230 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF4P48230 RNU6-105P-201ENST00000363909 104 ntBASIC3.23□□□□□ -1.89
TM4SF4P48230 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF4P48230 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM4SF4P48230 MIR592-201ENST00000384959 97 ntBASIC3.23□□□□□ -1.89
TM4SF4P48230 SNORD73A-201ENST00000386062 65 ntBASIC3.23□□□□□ -1.89
TM4SF4P48230 AC074117.2-201ENST00000417130 397 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms