Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.294-201ENST00000364916 102 ntBASIC4.74□□□□□ -1.65
VARSP26640 RNA5SP167-201ENST00000365461 116 ntBASIC4.74□□□□□ -1.65
VARSP26640 SNORA18.3-201ENST00000384122 132 ntBASIC4.74□□□□□ -1.65
VARSP26640 SNORA26.3-201ENST00000391119 136 ntBASIC4.74□□□□□ -1.65
VARSP26640 YPEL5P1-201ENST00000419731 367 ntBASIC4.74□□□□□ -1.65
VARSP26640 AC019205.3-201ENST00000424573 156 ntBASIC4.74□□□□□ -1.65
VARSP26640 AC000111.2-201ENST00000448200 210 ntBASIC4.74□□□□□ -1.65
VARSP26640 RPS27P1-201ENST00000450552 247 ntBASIC4.74□□□□□ -1.65
VARSP26640 RPS29P33-201ENST00000456717 146 ntBASIC4.74□□□□□ -1.65
VARSP26640 RPL26P9-201ENST00000457466 433 ntBASIC4.74□□□□□ -1.65
VARSP26640 snoU13.4-201ENST00000458916 104 ntBASIC4.74□□□□□ -1.65
VARSP26640 snoU13.24-201ENST00000458998 104 ntBASIC4.74□□□□□ -1.65
VARSP26640 AC078817.1-201ENST00000492623 435 ntBASIC4.74□□□□□ -1.65
VARSP26640 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.74□□□□□ -1.65
VARSP26640 SNORA31.8-201ENST00000516327 108 ntBASIC4.74□□□□□ -1.65
VARSP26640 SNORA31.16-201ENST00000516773 139 ntBASIC4.74□□□□□ -1.65
VARSP26640 FTX_3.1-201ENST00000610451 147 ntBASIC4.74□□□□□ -1.65
VARSP26640 MIR6780A-201ENST00000615089 68 ntBASIC4.74□□□□□ -1.65
VARSP26640 AP000346.3-201ENST00000622821 210 ntBASIC4.74□□□□□ -1.65
VARSP26640 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
VARSP26640 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.74□□□□□ -1.65
VARSP26640 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.74□□□□□ -1.65
VARSP26640 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VARSP26640 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VARSP26640 SNORA25.7-201ENST00000364375 127 ntBASIC4.73□□□□□ -1.65
VARSP26640 Y_RNA.251-201ENST00000364551 99 ntBASIC4.73□□□□□ -1.65
VARSP26640 RNU6-1264P-201ENST00000383891 107 ntBASIC4.73□□□□□ -1.65
VARSP26640 RNU1-73P-201ENST00000383971 164 ntBASIC4.73□□□□□ -1.65
VARSP26640 AL031003.1-201ENST00000404229 172 ntBASIC4.73□□□□□ -1.65
VARSP26640 AL606845.1-201ENST00000404881 255 ntBASIC4.73□□□□□ -1.65
VARSP26640 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.73□□□□□ -1.65
VARSP26640 EIF4HP2-201ENST00000424380 563 ntBASIC4.73□□□□□ -1.65
VARSP26640 AC011753.3-201ENST00000443436 406 ntBASIC4.73□□□□□ -1.65
VARSP26640 RPL39P29-201ENST00000447779 157 ntBASIC4.73□□□□□ -1.65
VARSP26640 HMGB3P8-201ENST00000449709 577 ntBASIC4.73□□□□□ -1.65
VARSP26640 AC010469.1-201ENST00000463864 576 ntBASIC4.73□□□□□ -1.65
VARSP26640 HMGB1P22-201ENST00000505315 124 ntBASIC4.73□□□□□ -1.65
VARSP26640 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.73□□□□□ -1.65
VARSP26640 RNA5SP392-201ENST00000516905 112 ntBASIC4.73□□□□□ -1.65
VARSP26640 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.73□□□□□ -1.65
VARSP26640 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.73□□□□□ -1.65
VARSP26640 AC108081.1-201ENST00000604358 221 ntBASIC4.73□□□□□ -1.65
VARSP26640 AL445567.2-201ENST00000618935 498 ntBASIC4.73□□□□□ -1.65
VARSP26640 AL022401.1-201ENST00000619498 108 ntBASIC4.73□□□□□ -1.65
VARSP26640 MIR3914-2-201ENST00000637339 95 ntBASIC4.73□□□□□ -1.65
VARSP26640 AC139713.2-214ENST00000642059 1811 ntBASIC4.73□□□□□ -1.65
VARSP26640 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VARSP26640 DHX9P1-201ENST00000436565 3076 ntBASIC4.73□□□□□ -1.65
VARSP26640 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.72□□□□□ -1.65
VARSP26640 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 AL136164.4-201ENST00000625013 2135 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC126755.2-208ENST00000327792 462 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC138969.1-213ENST00000331436 462 ntBASIC4.72□□□□□ -1.65
VARSP26640 RNU1-32P-201ENST00000363937 159 ntBASIC4.72□□□□□ -1.65
VARSP26640 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VARSP26640 Y_RNA.393-201ENST00000383936 102 ntBASIC4.72□□□□□ -1.65
VARSP26640 Y_RNA.415-201ENST00000384012 112 ntBASIC4.72□□□□□ -1.65
VARSP26640 RNU6-1181P-201ENST00000384191 106 ntBASIC4.72□□□□□ -1.65
VARSP26640 MIR526A2-201ENST00000390198 65 ntBASIC4.72□□□□□ -1.65
VARSP26640 MIR320B2-201ENST00000408479 138 ntBASIC4.72□□□□□ -1.65
VARSP26640 RNA5SP239-201ENST00000410218 129 ntBASIC4.72□□□□□ -1.65
VARSP26640 HMGN2P30-201ENST00000423237 256 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC091390.1-201ENST00000433904 331 ntBASIC4.72□□□□□ -1.65
VARSP26640 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.72□□□□□ -1.65
VARSP26640 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.72□□□□□ -1.65
VARSP26640 RPL37P4-201ENST00000448908 268 ntBASIC4.72□□□□□ -1.65
VARSP26640 HSPE1P13-201ENST00000451143 297 ntBASIC4.72□□□□□ -1.65
VARSP26640 AP000873.1-201ENST00000463987 400 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.72□□□□□ -1.65
VARSP26640 AC023141.12-201ENST00000512399 199 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.72□□□□□ -1.65
VARSP26640 AC091042.1-201ENST00000579213 173 ntBASIC4.72□□□□□ -1.65
VARSP26640 MIR5582-201ENST00000579697 68 ntBASIC4.72□□□□□ -1.65
VARSP26640 AL356575.1-201ENST00000603008 283 ntBASIC4.72□□□□□ -1.65
VARSP26640 AC073073.2-201ENST00000609827 2578 ntBASIC4.72□□□□□ -1.65
VARSP26640 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.72□□□□□ -1.65
VARSP26640 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VARSP26640 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
VARSP26640 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
VARSP26640 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VARSP26640 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.71□□□□□ -1.66
VARSP26640 RNU6-1205P-201ENST00000363625 106 ntBASIC4.71□□□□□ -1.66
VARSP26640 RNU6-728P-201ENST00000365375 104 ntBASIC4.71□□□□□ -1.66
VARSP26640 RPL21P17-201ENST00000397467 475 ntBASIC4.71□□□□□ -1.66
VARSP26640 RNU6-710P-201ENST00000410424 105 ntBASIC4.71□□□□□ -1.66
VARSP26640 CYCSP49-201ENST00000420810 319 ntBASIC4.71□□□□□ -1.66
VARSP26640 AC063976.4-201ENST00000421971 163 ntBASIC4.71□□□□□ -1.66
VARSP26640 AC068287.1-201ENST00000430283 295 ntBASIC4.71□□□□□ -1.66
VARSP26640 AL714022.1-201ENST00000439897 151 ntBASIC4.71□□□□□ -1.66
VARSP26640 AC012308.1-201ENST00000451232 178 ntBASIC4.71□□□□□ -1.66
VARSP26640 CKS1BP7-201ENST00000522230 235 ntBASIC4.71□□□□□ -1.66
VARSP26640 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.71□□□□□ -1.66
VARSP26640 AC015813.4-201ENST00000610469 179 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms