Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPRAP18433 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
PTPRAP18433 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPRAP18433 RNU6-704P-201ENST00000364162 103 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 Y_RNA.383-201ENST00000383855 97 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 Y_RNA.418-201ENST00000384029 102 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 RNU6-804P-201ENST00000384286 107 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 U3.37-201ENST00000408528 213 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 RNU5A-5P-201ENST00000411054 116 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 RPL19P1-201ENST00000411635 428 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPRAP18433 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPRAP18433 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 AL031659.1-201ENST00000447075 539 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPRAP18433 CYCSP35-201ENST00000451978 304 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 RPS26P28-201ENST00000470806 348 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 RPL26P26-201ENST00000480251 434 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 AK6P2-201ENST00000549020 471 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPRAP18433 H3F3AP1-201ENST00000559984 334 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 MIR4282-201ENST00000583613 67 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 AC136601.2-201ENST00000604356 474 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 SNORA62.6-201ENST00000606322 83 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 U6.106-201ENST00000636360 105 ntBASIC4.41□□□□□ -1.7
PTPRAP18433 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPRAP18433 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPRAP18433 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPRAP18433 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRAP18433 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPRAP18433 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PTPRAP18433 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPRAP18433 AL049781.1-201ENST00000623195 3585 ntBASIC4.4□□□□□ -1.7
PTPRAP18433 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PTPRAP18433 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PTPRAP18433 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.4□□□□□ -1.7
PTPRAP18433 RNU6-1181P-201ENST00000384191 106 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 RNU6-514P-201ENST00000384208 107 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPRAP18433 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPRAP18433 AL590383.1-201ENST00000428602 75 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 AC096638.1-201ENST00000444678 216 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 SSXP4-201ENST00000451349 245 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 RPL31P13-201ENST00000484151 370 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 GNRHR2P1-201ENST00000555315 631 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 CYCSP39-201ENST00000565821 309 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 AC024153.1-201ENST00000603103 365 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 AL591424.2-201ENST00000617023 128 ntBASIC4.4□□□□□ -1.71
PTPRAP18433 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPRAP18433 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTPRAP18433 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPRAP18433 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
PTPRAP18433 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPRAP18433 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PTPRAP18433 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 Y_RNA.8-201ENST00000362353 102 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 Y_RNA.233-201ENST00000364407 101 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 RNU6-923P-201ENST00000364753 107 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 RNU6-918P-201ENST00000391219 106 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 EIF1AXP1-201ENST00000419267 435 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 SNORA71B-202ENST00000439232 272 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 AC243964.1-201ENST00000441814 261 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 snoU13.4-201ENST00000458916 104 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 Y_RNA.638-201ENST00000459374 113 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 AC091959.1-201ENST00000495857 238 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 RAC1P2-201ENST00000511164 579 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPRAP18433 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPRAP18433 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 MIR5195-201ENST00000583555 115 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.39□□□□□ -1.71
PTPRAP18433 AC104465.1-201ENST00000611365 139 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTPRAP18433 MFSD8-236ENST00000641509 4050 ntBASIC4.39□□□□□ -1.71
PTPRAP18433 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPRAP18433 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRAP18433 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms