Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 SNORD56.1-201ENST00000362913 68 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 SNORD35B-201ENST00000363660 87 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 SNORD50.2-201ENST00000365465 70 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD8P13378 MIR30B-201ENST00000384850 88 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 MIR10B-201ENST00000385011 110 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 Y_RNA.597-201ENST00000410463 100 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 GPM6BP3-201ENST00000442797 145 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 RPL23AP3-201ENST00000453844 468 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 AP005660.1-201ENST00000522972 293 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 AC090281.1-201ENST00000523019 276 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 CYCSP39-201ENST00000565821 309 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 AC012468.1-201ENST00000604888 430 ntBASIC4.42□□□□□ -1.7
HOXD8P13378 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXD8P13378 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD8P13378 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
HOXD8P13378 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD8P13378 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 MTHFD2P2-201ENST00000407725 247 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD8P13378 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD8P13378 AC012308.1-201ENST00000451232 178 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD8P13378 RPL26P26-201ENST00000480251 434 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 AC006517.1-201ENST00000480485 328 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 HMGB1P22-201ENST00000505315 124 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 SNORA40.9-201ENST00000515895 93 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 RNU6-1219P-201ENST00000516143 112 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 RNU6-1073P-201ENST00000517182 106 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD8P13378 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD8P13378 AC005828.6-201ENST00000606610 232 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.41□□□□□ -1.7
HOXD8P13378 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
HOXD8P13378 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD8P13378 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD8P13378 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HOXD8P13378 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD8P13378 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.4□□□□□ -1.7
HOXD8P13378 MARK2P15-201ENST00000432204 2186 ntBASIC4.4□□□□□ -1.7
HOXD8P13378 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXD8P13378 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD8P13378 Y_RNA.230-201ENST00000364348 109 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 Y_RNA.262-201ENST00000364641 102 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 Y_RNA.446-201ENST00000384178 104 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 RNU6-1117P-201ENST00000384525 104 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 MIR483-201ENST00000385070 76 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 SNORA57.3-201ENST00000411095 141 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 AC093578.1-201ENST00000415219 368 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 YME1L1P1-201ENST00000429435 297 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 GOT2P5-201ENST00000433995 546 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 RPL37P4-201ENST00000448908 268 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 SNORD108-201ENST00000459332 71 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 RNU1-103P-201ENST00000516502 125 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 RNU6-1198P-201ENST00000516904 67 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD8P13378 HSPE1P4-201ENST00000550617 308 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD8P13378 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD8P13378 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD8P13378 AC019159.1-201ENST00000605094 187 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 AC011921.3-201ENST00000605540 361 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 AL365265.1-201ENST00000621045 234 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD8P13378 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD8P13378 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD8P13378 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD8P13378 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXD8P13378 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
HOXD8P13378 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HOXD8P13378 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD8P13378 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 UBE2WP1-201ENST00000362030 340 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 RNU6-961P-201ENST00000363893 105 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 RNU6-281P-201ENST00000384212 103 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 MIR200C-201ENST00000384980 68 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 HMGN2P30-201ENST00000423237 256 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD8P13378 UQCRBP2-201ENST00000447827 297 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 AC026403.1-201ENST00000518938 295 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 AL391261.3-201ENST00000557194 520 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD8P13378 ZNF192P1-203ENST00000565888 810 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 AC007390.2-201ENST00000606229 3803 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.39□□□□□ -1.71
HOXD8P13378 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD8P13378 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD8P13378 ZNF204P-201ENST00000416749 2397 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 RBBP8P1-201ENST00000449447 1844 ntBASIC4.38□□□□□ -1.71
HOXD8P13378 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD8P13378 RNA5SP119-201ENST00000362715 117 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms