Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD4P01730 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CD4P01730 VN1R108P-201ENST00000431580 830 ntBASIC2.86□□□□□ -1.95
CD4P01730 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.86□□□□□ -1.95
CD4P01730 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD4P01730 CACYBPP2-201ENST00000453625 678 ntBASIC2.86□□□□□ -1.95
CD4P01730 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CD4P01730 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.86□□□□□ -1.95
CD4P01730 AC091885.1-201ENST00000506658 268 ntBASIC2.86□□□□□ -1.95
CD4P01730 AC008526.1-201ENST00000509149 338 ntBASIC2.86□□□□□ -1.95
CD4P01730 SNORA31.23-201ENST00000517219 133 ntBASIC2.86□□□□□ -1.95
CD4P01730 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.86□□□□□ -1.95
CD4P01730 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.86□□□□□ -1.95
CD4P01730 CYCSP27-201ENST00000527643 293 ntBASIC2.86□□□□□ -1.95
CD4P01730 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.86□□□□□ -1.95
CD4P01730 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.86□□□□□ -1.95
CD4P01730 AC090897.2-201ENST00000581715 130 ntBASIC2.86□□□□□ -1.95
CD4P01730 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
CD4P01730 U4.3-201ENST00000621047 82 ntBASIC2.86□□□□□ -1.95
CD4P01730 AP003400.5-201ENST00000624827 617 ntBASIC2.86□□□□□ -1.95
CD4P01730 AC002543.1-201ENST00000299783 1954 ntBASIC2.86□□□□□ -1.95
CD4P01730 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CD4P01730 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CD4P01730 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.86□□□□□ -1.95
CD4P01730 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CD4P01730 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CD4P01730 RNU6-529P-201ENST00000363383 104 ntBASIC2.85□□□□□ -1.95
CD4P01730 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CD4P01730 AL133475.1-201ENST00000404414 305 ntBASIC2.85□□□□□ -1.95
CD4P01730 RNA5SP425-201ENST00000410336 112 ntBASIC2.85□□□□□ -1.95
CD4P01730 RNU6-1245P-201ENST00000411130 106 ntBASIC2.85□□□□□ -1.95
CD4P01730 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
CD4P01730 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.85□□□□□ -1.95
CD4P01730 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CD4P01730 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.85□□□□□ -1.95
CD4P01730 CKS1BP2-201ENST00000497342 240 ntBASIC2.85□□□□□ -1.95
CD4P01730 RN7SKP24-201ENST00000515888 284 ntBASIC2.85□□□□□ -1.95
CD4P01730 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
CD4P01730 Y_RNA.693-201ENST00000516641 110 ntBASIC2.85□□□□□ -1.95
CD4P01730 AL133241.1-201ENST00000556832 487 ntBASIC2.85□□□□□ -1.95
CD4P01730 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.85□□□□□ -1.95
CD4P01730 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
CD4P01730 uc_338.15-201ENST00000615470 191 ntBASIC2.85□□□□□ -1.95
CD4P01730 U4atac.1-201ENST00000618345 95 ntBASIC2.85□□□□□ -1.95
CD4P01730 AC008121.3-201ENST00000618726 433 ntBASIC2.85□□□□□ -1.95
CD4P01730 AC099654.12-201ENST00000639868 649 ntBASIC2.85□□□□□ -1.95
CD4P01730 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CD4P01730 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
CD4P01730 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CD4P01730 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CD4P01730 RNU6-527P-201ENST00000363425 104 ntBASIC2.84□□□□□ -1.95
CD4P01730 RNU6-266P-201ENST00000364225 107 ntBASIC2.84□□□□□ -1.95
CD4P01730 SNORA69-201ENST00000383895 132 ntBASIC2.84□□□□□ -1.95
CD4P01730 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.84□□□□□ -1.95
CD4P01730 SNORD88.1-201ENST00000408684 91 ntBASIC2.84□□□□□ -1.95
CD4P01730 RNU2-23P-201ENST00000410545 195 ntBASIC2.84□□□□□ -1.95
CD4P01730 RN7SKP223-201ENST00000410582 62 ntBASIC2.84□□□□□ -1.95
CD4P01730 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.84□□□□□ -1.95
CD4P01730 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.84□□□□□ -1.95
CD4P01730 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.84□□□□□ -1.95
CD4P01730 AP001025.1-201ENST00000486139 332 ntBASIC2.84□□□□□ -1.95
CD4P01730 RNU6-377P-201ENST00000515965 102 ntBASIC2.84□□□□□ -1.95
CD4P01730 SNORA25.17-201ENST00000517184 124 ntBASIC2.84□□□□□ -1.95
CD4P01730 IGKV3-31-201ENST00000523109 329 ntBASIC2.84□□□□□ -1.95
CD4P01730 COPS8P3-201ENST00000526024 482 ntBASIC2.84□□□□□ -1.95
CD4P01730 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.84□□□□□ -1.95
CD4P01730 MIR4648-201ENST00000580107 72 ntBASIC2.84□□□□□ -1.95
CD4P01730 MIR4424-201ENST00000585257 86 ntBASIC2.84□□□□□ -1.95
CD4P01730 VN1R107P-201ENST00000601784 209 ntBASIC2.84□□□□□ -1.95
CD4P01730 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.84□□□□□ -1.95
CD4P01730 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CD4P01730 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CD4P01730 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CD4P01730 RNU6-1303P-201ENST00000364841 107 ntBASIC2.83□□□□□ -1.96
CD4P01730 RNU6-1072P-201ENST00000384703 107 ntBASIC2.83□□□□□ -1.96
CD4P01730 RNU6-443P-201ENST00000384780 107 ntBASIC2.83□□□□□ -1.96
CD4P01730 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.83□□□□□ -1.96
CD4P01730 AL139415.2-201ENST00000431968 163 ntBASIC2.83□□□□□ -1.96
CD4P01730 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.83□□□□□ -1.96
CD4P01730 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.83□□□□□ -1.96
CD4P01730 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
CD4P01730 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.83□□□□□ -1.96
CD4P01730 GSTA11P-201ENST00000452866 669 ntBASIC2.83□□□□□ -1.96
CD4P01730 AC090096.1-201ENST00000489168 390 ntBASIC2.83□□□□□ -1.96
CD4P01730 SRIP1-201ENST00000489235 288 ntBASIC2.83□□□□□ -1.96
CD4P01730 AC022880.1-201ENST00000534017 973 ntBASIC2.83□□□□□ -1.96
CD4P01730 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.83□□□□□ -1.96
CD4P01730 AL512360.1-201ENST00000555346 234 ntBASIC2.83□□□□□ -1.96
CD4P01730 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.83□□□□□ -1.96
CD4P01730 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.83□□□□□ -1.96
CD4P01730 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CD4P01730 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.83□□□□□ -1.96
CD4P01730 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD4P01730 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CD4P01730 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD4P01730 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CD4P01730 SNORD56.1-201ENST00000362913 68 ntBASIC2.82□□□□□ -1.96
CD4P01730 Y_RNA.318-201ENST00000365131 97 ntBASIC2.82□□□□□ -1.96
CD4P01730 MIR186-201ENST00000384988 86 ntBASIC2.82□□□□□ -1.96
CD4P01730 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms