Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
RNF40O75150 AC126755.2-208ENST00000327792 462 ntBASIC5.14□□□□□ -1.59
RNF40O75150 AC138969.1-213ENST00000331436 462 ntBASIC5.14□□□□□ -1.59
RNF40O75150 RNA5SP191-201ENST00000362585 102 ntBASIC5.14□□□□□ -1.59
RNF40O75150 Y_RNA.243-201ENST00000364481 109 ntBASIC5.14□□□□□ -1.59
RNF40O75150 AC068538.1-201ENST00000376856 336 ntBASIC5.14□□□□□ -1.59
RNF40O75150 RNU6-880P-201ENST00000384526 107 ntBASIC5.14□□□□□ -1.59
RNF40O75150 MIR548A3-201ENST00000385297 97 ntBASIC5.14□□□□□ -1.59
RNF40O75150 RNA5SP372-201ENST00000390836 115 ntBASIC5.14□□□□□ -1.59
RNF40O75150 RNA5SP113-201ENST00000410486 84 ntBASIC5.14□□□□□ -1.59
RNF40O75150 AC092047.1-201ENST00000424997 240 ntBASIC5.14□□□□□ -1.59
RNF40O75150 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
RNF40O75150 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF40O75150 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF40O75150 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF40O75150 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
RNF40O75150 SNORA70.16-201ENST00000516390 95 ntBASIC5.14□□□□□ -1.59
RNF40O75150 RNU1-103P-201ENST00000516502 125 ntBASIC5.14□□□□□ -1.59
RNF40O75150 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF40O75150 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RNF40O75150 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF40O75150 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF40O75150 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF40O75150 AC022336.2-201ENST00000568966 2538 ntBASIC5.14□□□□□ -1.59
RNF40O75150 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RNF40O75150 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF40O75150 U8.1-201ENST00000362843 134 ntBASIC5.13□□□□□ -1.59
RNF40O75150 SNORA2.3-201ENST00000383920 135 ntBASIC5.13□□□□□ -1.59
RNF40O75150 SNORA18.3-201ENST00000384122 132 ntBASIC5.13□□□□□ -1.59
RNF40O75150 RNU6-178P-201ENST00000384631 104 ntBASIC5.13□□□□□ -1.59
RNF40O75150 MIRLET7F2-201ENST00000385277 83 ntBASIC5.13□□□□□ -1.59
RNF40O75150 SNORA48.5-201ENST00000391143 135 ntBASIC5.13□□□□□ -1.59
RNF40O75150 HDGFP1-201ENST00000405943 252 ntBASIC5.13□□□□□ -1.59
RNF40O75150 FTH1P15-201ENST00000406984 280 ntBASIC5.13□□□□□ -1.59
RNF40O75150 Y_RNA.617-201ENST00000410920 90 ntBASIC5.13□□□□□ -1.59
RNF40O75150 YPEL5P1-201ENST00000419731 367 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AL691482.1-201ENST00000453255 87 ntBASIC5.13□□□□□ -1.59
RNF40O75150 HMGB1P22-201ENST00000505315 124 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AC090142.3-201ENST00000519012 385 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AP004371.1-201ENST00000525240 214 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF40O75150 AC133485.4-201ENST00000561835 220 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AC138907.4-201ENST00000570107 226 ntBASIC5.13□□□□□ -1.59
RNF40O75150 AL391358.1-201ENST00000605342 190 ntBASIC5.13□□□□□ -1.59
RNF40O75150 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RNF40O75150 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNF40O75150 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF40O75150 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 RNU1-20P-201ENST00000363314 162 ntBASIC5.12□□□□□ -1.59
RNF40O75150 RNU6-640P-201ENST00000363693 105 ntBASIC5.12□□□□□ -1.59
RNF40O75150 RNA5SP28-201ENST00000363841 119 ntBASIC5.12□□□□□ -1.59
RNF40O75150 RNY3P5-201ENST00000384127 102 ntBASIC5.12□□□□□ -1.59
RNF40O75150 RNU6-19P-201ENST00000384718 107 ntBASIC5.12□□□□□ -1.59
RNF40O75150 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF40O75150 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF40O75150 RPL31P41-201ENST00000477967 372 ntBASIC5.12□□□□□ -1.59
RNF40O75150 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF40O75150 Y_RNA.692-201ENST00000516627 105 ntBASIC5.12□□□□□ -1.59
RNF40O75150 RNU2-60P-201ENST00000517290 128 ntBASIC5.12□□□□□ -1.59
RNF40O75150 MIR4724-201ENST00000579485 89 ntBASIC5.12□□□□□ -1.59
RNF40O75150 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF40O75150 AC006065.5-201ENST00000623427 349 ntBASIC5.12□□□□□ -1.59
RNF40O75150 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 AC004925.1-201ENST00000624256 2706 ntBASIC5.12□□□□□ -1.59
RNF40O75150 MAPK10-263ENST00000641052 4307 ntBASIC5.12□□□□□ -1.59
RNF40O75150 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
RNF40O75150 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.12□□□□□ -1.59
RNF40O75150 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF40O75150 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF40O75150 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF40O75150 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF40O75150 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF40O75150 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF40O75150 Y_RNA.114-201ENST00000363265 113 ntBASIC5.11□□□□□ -1.59
RNF40O75150 Y_RNA.120-201ENST00000363304 110 ntBASIC5.11□□□□□ -1.59
RNF40O75150 SNORA62-201ENST00000365493 153 ntBASIC5.11□□□□□ -1.59
RNF40O75150 RNU6-1275P-201ENST00000391087 107 ntBASIC5.11□□□□□ -1.59
RNF40O75150 RNU6-855P-201ENST00000410395 104 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AL590383.1-201ENST00000428602 75 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AC068287.1-201ENST00000430283 295 ntBASIC5.11□□□□□ -1.59
RNF40O75150 RPS17P2-201ENST00000461663 408 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF40O75150 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF40O75150 ATP5J2P6-201ENST00000565203 266 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AC053481.4-201ENST00000583164 216 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AC025946.2-201ENST00000603398 234 ntBASIC5.11□□□□□ -1.59
RNF40O75150 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF40O75150 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF40O75150 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms