Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
GFRA3O60609 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
GFRA3O60609 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
GFRA3O60609 Y_RNA.190-201ENST00000363964 101 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 RNU6-1141P-201ENST00000364520 107 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 RNA5SP513-201ENST00000364648 118 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 SNORD115-35-201ENST00000365122 82 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 MIR137-201ENST00000385223 102 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 Y_RNA.601-201ENST00000410500 113 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 AC093578.1-201ENST00000415219 368 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.69□□□□□ -1.66
GFRA3O60609 AL365205.2-201ENST00000594586 68 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 AC112484.5-201ENST00000624189 228 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA3O60609 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.69□□□□□ -1.66
GFRA3O60609 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.69□□□□□ -1.66
GFRA3O60609 AC005261.2-201ENST00000593427 4258 ntBASIC4.69□□□□□ -1.66
GFRA3O60609 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
GFRA3O60609 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
GFRA3O60609 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GFRA3O60609 STX3-208ENST00000641815 3236 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
GFRA3O60609 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA3O60609 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GFRA3O60609 RN7SKP267-201ENST00000410381 285 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 EIF4A1P3-201ENST00000411521 244 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 EIF4HP2-201ENST00000424380 563 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 AC078809.1-201ENST00000427601 140 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.68□□□□□ -1.66
GFRA3O60609 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA3O60609 RNU1-6P-201ENST00000516290 144 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 RNU6-344P-201ENST00000516635 111 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.68□□□□□ -1.66
GFRA3O60609 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.68□□□□□ -1.66
GFRA3O60609 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 AC011471.1-201ENST00000585766 187 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 AC012314.7-201ENST00000619693 93 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA3O60609 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.68□□□□□ -1.66
GFRA3O60609 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
GFRA3O60609 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GFRA3O60609 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
GFRA3O60609 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA3O60609 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
GFRA3O60609 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
GFRA3O60609 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 MIR383-201ENST00000362257 73 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 RNU6-674P-201ENST00000363831 107 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 Y_RNA.245-201ENST00000364493 95 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 RNU6-712P-201ENST00000410558 100 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AC096949.1-201ENST00000412047 152 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AC098614.2-201ENST00000426040 255 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 NDUFB1P1-201ENST00000435191 180 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AL133547.1-201ENST00000448546 220 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 RPS17P2-201ENST00000461663 408 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AC011406.1-201ENST00000512440 370 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 SNORD77.4-201ENST00000516158 81 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AP004607.1-201ENST00000524456 203 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA3O60609 AC096577.2-201ENST00000611455 153 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AL359198.2-201ENST00000611836 194 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 MIR6875-201ENST00000617506 72 ntBASIC4.67□□□□□ -1.66
GFRA3O60609 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.67□□□□□ -1.66
GFRA3O60609 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA3O60609 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA3O60609 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA3O60609 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
GFRA3O60609 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 OR14L1P-202ENST00000641545 3009 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms