Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SET-203ENST00000372688 801 ntTSL 2 BASIC2.55□□□□□ -2
SSX4O60224 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSX4O60224 AC074117.2-201ENST00000417130 397 ntBASIC2.55□□□□□ -2
SSX4O60224 AL139415.2-201ENST00000431968 163 ntBASIC2.55□□□□□ -2
SSX4O60224 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.55□□□□□ -2
SSX4O60224 AL031274.1-201ENST00000450334 232 ntBASIC2.55□□□□□ -2
SSX4O60224 RPS29P26-201ENST00000477483 171 ntBASIC2.55□□□□□ -2
SSX4O60224 AC090525.1-201ENST00000479116 478 ntBASIC2.55□□□□□ -2
SSX4O60224 AC069439.1-201ENST00000494739 167 ntBASIC2.55□□□□□ -2
SSX4O60224 AC091826.1-201ENST00000514065 313 ntBASIC2.55□□□□□ -2
SSX4O60224 RNU6-377P-201ENST00000515965 102 ntBASIC2.55□□□□□ -2
SSX4O60224 SNORA31.23-201ENST00000517219 133 ntBASIC2.55□□□□□ -2
SSX4O60224 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.55□□□□□ -2
SSX4O60224 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.55□□□□□ -2
SSX4O60224 RNU6-323P-201ENST00000521915 107 ntBASIC2.55□□□□□ -2
SSX4O60224 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
SSX4O60224 AC021646.1-201ENST00000605469 484 ntBASIC2.55□□□□□ -2
SSX4O60224 AL121917.1-203ENST00000605534 577 ntBASIC2.55□□□□□ -2
SSX4O60224 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.55□□□□□ -2
SSX4O60224 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
SSX4O60224 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.54□□□□□ -2
SSX4O60224 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
SSX4O60224 MTND5P30-201ENST00000452896 1731 ntBASIC2.54□□□□□ -2
SSX4O60224 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SSX4O60224 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SSX4O60224 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSX4O60224 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SSX4O60224 SNORD56.1-201ENST00000362913 68 ntBASIC2.54□□□□□ -2
SSX4O60224 RNU6-461P-201ENST00000364195 107 ntBASIC2.54□□□□□ -2
SSX4O60224 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
SSX4O60224 RNA5SP118-201ENST00000410385 109 ntBASIC2.54□□□□□ -2
SSX4O60224 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.54□□□□□ -2
SSX4O60224 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.54□□□□□ -2
SSX4O60224 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.54□□□□□ -2
SSX4O60224 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
SSX4O60224 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
SSX4O60224 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.54□□□□□ -2
SSX4O60224 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.54□□□□□ -2
SSX4O60224 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.54□□□□□ -2
SSX4O60224 RPL36AP48-201ENST00000485521 314 ntBASIC2.54□□□□□ -2
SSX4O60224 AP001025.1-201ENST00000486139 332 ntBASIC2.54□□□□□ -2
SSX4O60224 RPL23AP49-201ENST00000492925 468 ntBASIC2.54□□□□□ -2
SSX4O60224 AC083906.5-201ENST00000503722 328 ntBASIC2.54□□□□□ -2
SSX4O60224 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
SSX4O60224 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
SSX4O60224 SNORA25.11-201ENST00000515935 105 ntBASIC2.54□□□□□ -2
SSX4O60224 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
SSX4O60224 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.54□□□□□ -2
SSX4O60224 AC109479.2-201ENST00000517842 174 ntBASIC2.54□□□□□ -2
SSX4O60224 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.54□□□□□ -2
SSX4O60224 AP000763.2-201ENST00000540641 163 ntBASIC2.54□□□□□ -2
SSX4O60224 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSX4O60224 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.54□□□□□ -2
SSX4O60224 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
SSX4O60224 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
SSX4O60224 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
SSX4O60224 ELOCP29-201ENST00000588193 334 ntBASIC2.54□□□□□ -2
SSX4O60224 RPS15AP11-201ENST00000594193 385 ntBASIC2.54□□□□□ -2
SSX4O60224 CTHRC1P1-201ENST00000605383 469 ntBASIC2.54□□□□□ -2
SSX4O60224 RNU6-91P-201ENST00000607774 107 ntBASIC2.54□□□□□ -2
SSX4O60224 AC068944.2-201ENST00000610373 403 ntBASIC2.54□□□□□ -2
SSX4O60224 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
SSX4O60224 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.54□□□□□ -2
SSX4O60224 AC097372.5-201ENST00000623665 376 ntBASIC2.54□□□□□ -2
SSX4O60224 AC090617.10-201ENST00000624308 134 ntBASIC2.54□□□□□ -2
SSX4O60224 AC100810.6-201ENST00000638068 285 ntBASIC2.54□□□□□ -2
SSX4O60224 HAUS6P2-201ENST00000433254 2404 ntBASIC2.54□□□□□ -2
SSX4O60224 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSX4O60224 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
SSX4O60224 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SSX4O60224 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SSX4O60224 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.53□□□□□ -2
SSX4O60224 RNU6-428P-201ENST00000362942 107 ntBASIC2.53□□□□□ -2
SSX4O60224 RNU6-527P-201ENST00000363425 104 ntBASIC2.53□□□□□ -2
SSX4O60224 RNU6-622P-201ENST00000384272 103 ntBASIC2.53□□□□□ -2
SSX4O60224 SNORD73A-201ENST00000386062 65 ntBASIC2.53□□□□□ -2
SSX4O60224 RNU6-1140P-201ENST00000410517 106 ntBASIC2.53□□□□□ -2
SSX4O60224 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.53□□□□□ -2
SSX4O60224 AL117339.3-201ENST00000418733 162 ntBASIC2.53□□□□□ -2
SSX4O60224 AL139132.1-201ENST00000431587 344 ntBASIC2.53□□□□□ -2
SSX4O60224 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
SSX4O60224 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.53□□□□□ -2
SSX4O60224 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
SSX4O60224 AC087854.1-201ENST00000519706 414 ntBASIC2.53□□□□□ -2
SSX4O60224 COPS8P3-201ENST00000526024 482 ntBASIC2.53□□□□□ -2
SSX4O60224 AC025423.5-201ENST00000550230 219 ntBASIC2.53□□□□□ -2
SSX4O60224 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.53□□□□□ -2
SSX4O60224 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.53□□□□□ -2
SSX4O60224 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
SSX4O60224 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.53□□□□□ -2
SSX4O60224 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
SSX4O60224 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2
SSX4O60224 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.53□□□□□ -2
SSX4O60224 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2.01
SSX4O60224 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSX4O60224 Y_RNA.157-201ENST00000363638 102 ntBASIC2.52□□□□□ -2.01
SSX4O60224 RNU6-105P-201ENST00000363909 104 ntBASIC2.52□□□□□ -2.01
SSX4O60224 RNU6-487P-201ENST00000365430 104 ntBASIC2.52□□□□□ -2.01
SSX4O60224 RNU6-827P-201ENST00000365553 106 ntBASIC2.52□□□□□ -2.01
SSX4O60224 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms