Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-1222P-201ENST00000384615 107 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6-95P-201ENST00000384697 107 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RNA5SP229-201ENST00000410809 99 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 MTND4P18-201ENST00000447010 465 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AMD1P1-201ENST00000457220 922 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RPL9P9-202ENST00000466501 579 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 RN7SL504P-201ENST00000494496 287 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 Y_RNA.702-201ENST00000516843 96 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR4790-201ENST00000577799 79 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC103810.1-201ENST00000579873 453 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC073410.2-201ENST00000603240 332 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AL355073.2-201ENST00000612106 557 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR8057-201ENST00000620957 69 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 AC241585.2-209ENST00000638217 143 ntBASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A3BPQ9Y5P4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 OR56A5-201ENST00000340110 738 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR544A-201ENST00000384855 91 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU2-23P-201ENST00000410545 195 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 RPS15AP7-201ENST00000439294 405 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AC243964.1-201ENST00000441814 261 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 Z96811.1-201ENST00000445880 108 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 MTND1P17-201ENST00000448961 204 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6-1088P-201ENST00000516850 104 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6-612P-201ENST00000516909 102 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 MIR5004-201ENST00000579078 107 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AC004832.5-201ENST00000608677 401 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 AL591516.1-201ENST00000611326 274 ntBASIC3.61□□□□□ -1.83
COL4A3BPQ9Y5P4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU4-47P-201ENST00000410876 114 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 RNU6-325P-201ENST00000411132 105 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 BX276092.3-201ENST00000424182 230 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 RPL39P29-201ENST00000447779 157 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 RN7SKP282-201ENST00000516824 299 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 SCARNA3-201ENST00000517097 143 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC009812.2-201ENST00000517657 457 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC093331.1-201ENST00000521474 169 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC115990.1-201ENST00000526957 301 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 AC092794.2-201ENST00000620933 563 ntBASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A3BPQ9Y5P4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 SNORD62.1-201ENST00000362541 86 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 SNORD56.3-201ENST00000363507 71 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AP000275.1-201ENST00000411943 390 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AC074085.1-201ENST00000413598 418 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AC107399.1-201ENST00000451226 265 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AP005639.2-201ENST00000527592 928 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AP001836.1-201ENST00000604675 523 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AC018889.1-201ENST00000605372 397 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 AC005858.4-201ENST00000623191 700 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 MTND4P12-201ENST00000498999 1377 ntBASIC3.59□□□□□ -1.83
COL4A3BPQ9Y5P4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.59□□□□□ -1.84
COL4A3BPQ9Y5P4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
COL4A3BPQ9Y5P4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-227P-201ENST00000362865 103 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 SNORD81.2-201ENST00000365153 76 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-790P-201ENST00000384479 105 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU1-57P-201ENST00000384491 166 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 RNU6-692P-201ENST00000384496 107 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 MIR627-201ENST00000384979 97 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 PDCL2P1-201ENST00000419302 352 ntBASIC3.58□□□□□ -1.84
COL4A3BPQ9Y5P4 NUP35P1-201ENST00000422734 947 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms