Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC134503.1-201ENST00000633048 54 ntBASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 AL079305.1-201ENST00000623159 3008 ntBASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA9Q9Y5G4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 Y_RNA.404-201ENST00000383978 102 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC002075.2-201ENST00000425207 252 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC007677.1-201ENST00000445757 515 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 MTCO3P10-201ENST00000455912 772 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RPS29P27-201ENST00000463711 170 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RN7SL807P-201ENST00000470923 297 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC109329.1-201ENST00000518744 317 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC115990.1-201ENST00000526957 301 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC023442.1-201ENST00000531247 422 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC090897.2-201ENST00000581715 130 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC012493.2-201ENST00000595083 291 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AC009541.1-201ENST00000438279 2662 ntBASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA9Q9Y5G4 MTND5P9-201ENST00000503854 1755 ntBASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA9Q9Y5G4 RNU6-490P-201ENST00000362985 107 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORD42.2-201ENST00000365570 69 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-622P-201ENST00000384272 103 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR544A-201ENST00000384855 91 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RBMY2UP-201ENST00000453474 324 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AP001025.1-201ENST00000486139 332 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 TRBV12-2-201ENST00000489763 344 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR3651-201ENST00000630427 90 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AP000553.6-201ENST00000641242 118 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AC119674.1-207ENST00000641355 633 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.87
PCDHGA9Q9Y5G4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORD114-19-201ENST00000363072 75 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORA63-201ENST00000363450 132 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1059P-201ENST00000363752 98 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU1-33P-201ENST00000364249 162 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-890P-201ENST00000384121 107 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RPL22P13-201ENST00000493291 347 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RAC1P2-201ENST00000511164 579 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA9Q9Y5G4 MIR5696-201ENST00000578474 85 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms