Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HPS5Q9UPZ3 AC018555.1-201ENST00000567548 1980 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC099654.7-201ENST00000635788 2127 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC093535.2-201ENST00000624769 2326 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RNU6-640P-201ENST00000363693 105 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RNU6-728P-201ENST00000365375 104 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 MIR200C-201ENST00000384980 68 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RNU6-1228P-201ENST00000391014 107 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AL512633.1-201ENST00000399931 655 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RN7SKP167-201ENST00000411047 285 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RNU6-1245P-201ENST00000411130 106 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 RN7SKP53-201ENST00000411337 315 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC098614.2-201ENST00000426040 255 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC012468.1-201ENST00000604888 430 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AC107068.1-201ENST00000563286 4218 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 ZNF137P-201ENST00000456718 1920 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 AL596211.1-201ENST00000569873 2277 ntBASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.36□□□□□ -1.55
HPS5Q9UPZ3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 RNU6-324P-201ENST00000363957 106 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 RNU6-1082P-201ENST00000364574 107 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 SNORA71.2-201ENST00000364941 134 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 Y_RNA.348-201ENST00000365403 103 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AL606845.1-201ENST00000404881 255 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 RPL39P29-201ENST00000447779 157 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AL132838.2-201ENST00000492041 314 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 PARP4P3-201ENST00000510265 317 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 RN7SKP46-201ENST00000515942 234 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 Y_RNA.692-201ENST00000516627 105 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC090142.3-201ENST00000519012 385 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC107016.1-201ENST00000550463 337 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 MIR5688-201ENST00000580619 83 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AL121890.5-201ENST00000620848 304 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC125257.1-201ENST00000560400 2930 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC015813.6-201ENST00000624409 5808 ntBASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS5Q9UPZ3 AC133552.1-201ENST00000569988 4007 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 U3.9-201ENST00000363823 204 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 U3.37-201ENST00000408528 213 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 RNA5SP31-201ENST00000411144 127 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 FTH1P6-201ENST00000430768 320 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC011998.1-201ENST00000433403 117 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC006026.2-201ENST00000457376 180 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 Z95331.1-201ENST00000623075 23112 ntBASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS5Q9UPZ3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HPS5Q9UPZ3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.34□□□□□ -1.56
HPS5Q9UPZ3 OR51H2P-202ENST00000641424 3046 ntBASIC5.34□□□□□ -1.56
HPS5Q9UPZ3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 Y_RNA.229-201ENST00000364347 113 ntBASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 SNORD58C-201ENST00000365223 64 ntBASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 RNU6-793P-201ENST00000384233 104 ntBASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 RNU6-19P-201ENST00000384718 107 ntBASIC5.33□□□□□ -1.56
HPS5Q9UPZ3 MIR449B-201ENST00000384995 97 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms