Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SMG1P4-204ENST00000523028 4131 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 RBBP8P1-201ENST00000449447 1844 ntBASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
ZC3H4Q9UPT8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-898P-201ENST00000365627 104 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 SNORA5A-201ENST00000384111 134 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 MIR183-201ENST00000384958 110 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 MIR325-201ENST00000385260 98 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 RNA5SP213-201ENST00000391031 106 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-1135P-201ENST00000411083 103 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 RPS26P2-201ENST00000440331 348 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 MIR4308-201ENST00000580634 81 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 AC024153.1-201ENST00000603103 365 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
ZC3H4Q9UPT8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 MIR3074-201ENST00000384885 81 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 MIR487A-201ENST00000385009 80 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 U3.39-201ENST00000408569 239 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 RNU2-51P-201ENST00000410708 197 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 SNORA74C-2-201ENST00000411179 201 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AL691449.1-201ENST00000426570 421 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 Z82210.1-201ENST00000440037 231 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC009237.8-201ENST00000445492 379 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 UQCRBP2-201ENST00000447827 297 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC074133.1-201ENST00000515696 183 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 RNU1-95P-201ENST00000516357 160 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 RNU1-128P-201ENST00000516704 160 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 RNA5SP468-201ENST00000516782 93 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-1183P-201ENST00000517054 60 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AP005660.1-201ENST00000522972 293 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC005176.2-201ENST00000596933 147 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC136601.2-201ENST00000604356 474 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 AC024581.2-201ENST00000619986 252 ntBASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZC3H4Q9UPT8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 SNORD116-20-201ENST00000384529 92 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 RN7SKP156-201ENST00000410308 342 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 SNORA40.9-201ENST00000515895 93 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 CYCSP30-201ENST00000546447 172 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 CYCSP39-201ENST00000565821 309 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 AL034408.1-202ENST00000636088 415 ntBASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZC3H4Q9UPT8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 SNORD56.1-201ENST00000362913 68 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 Y_RNA.230-201ENST00000364348 109 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 Y_RNA.262-201ENST00000364641 102 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-281P-201ENST00000384212 103 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-417P-201ENST00000384712 107 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 SNORD2.1-201ENST00000458762 69 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 IGKV2D-19-201ENST00000523346 262 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AL391261.3-201ENST00000557194 520 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 LINC00933-203ENST00000559812 219 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AC091895.1-201ENST00000624494 256 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 U6.105-201ENST00000637379 88 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 AL672296.1-201ENST00000427780 2158 ntBASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZC3H4Q9UPT8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 SNORA72.2-201ENST00000365028 127 ntBASIC5.09□□□□□ -1.59
ZC3H4Q9UPT8 RNU6-140P-201ENST00000384566 108 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms