Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC090079.2-201ENST00000575289 768 ntBASIC-0.2□□□□□ -2.44
CHD7Q9P2D1 AC087685.1-201ENST00000587507 141 ntBASIC-0.2□□□□□ -2.44
CHD7Q9P2D1 AC010900.2-201ENST00000604508 210 ntBASIC-0.2□□□□□ -2.44
CHD7Q9P2D1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
CHD7Q9P2D1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHD7Q9P2D1 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR200A-201ENST00000384875 90 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR218-1-201ENST00000384999 110 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR1285-2-201ENST00000408311 88 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR4765-201ENST00000585007 77 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC024257.5-201ENST00000612739 531 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 RNU2-7P-201ENST00000410794 178 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AL512844.2-201ENST00000433990 593 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MTCO1P44-201ENST00000441935 243 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC098869.1-201ENST00000481627 292 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC114981.1-201ENST00000503897 678 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 SNORA40.12-201ENST00000516329 111 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR561-201ENST00000385216 97 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 DHFRP6-201ENST00000401776 268 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC073261.1-201ENST00000429409 121 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC090330.1-201ENST00000588646 764 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AL022345.1-201ENST00000607292 135 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 MIR6864-201ENST00000617935 70 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC027309.3-201ENST00000623419 351 ntBASIC-0.21□□□□□ -2.44
CHD7Q9P2D1 AC092125.1-201ENST00000562568 1995 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 RNU6-160P-201ENST00000384591 107 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 RPS15AP40-201ENST00000419621 391 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 RNFT1P2-201ENST00000443064 757 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC105758.1-201ENST00000506038 399 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC074344.1-201ENST00000512823 224 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC125611.1-201ENST00000549563 229 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 SNRPGP20-201ENST00000604477 205 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC090578.1-201ENST00000604955 591 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC121334.2-201ENST00000605387 271 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 BX284668.6-201ENST00000606899 438 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 AC019131.2-201ENST00000609071 870 ntBASIC-0.22□□□□□ -2.44
CHD7Q9P2D1 RNU6-657P-201ENST00000383904 107 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AL049545.1-201ENST00000401856 572 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 MIR1267-201ENST00000408723 78 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AL353777.1-201ENST00000425552 326 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 U8.21-201ENST00000459536 136 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 SNORA70.22-201ENST00000517160 124 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 PCNAP1-202ENST00000595299 752 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AL121992.2-201ENST00000606262 256 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 AC091304.9-201ENST00000612091 226 ntBASIC-0.22□□□□□ -2.45
CHD7Q9P2D1 SNORA1.1-201ENST00000364671 133 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 RNU6-877P-201ENST00000383868 107 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 RPS3AP1-201ENST00000413190 320 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AC138623.1-201ENST00000418060 216 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 MTCO2P20-201ENST00000437339 673 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 RNU6-420P-201ENST00000458780 107 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AP003066.2-201ENST00000529375 555 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 MTND2P17-201ENST00000550281 688 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AC233702.2-202ENST00000562547 291 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AP001330.4-201ENST00000604350 154 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 RNA5SP264-201ENST00000363115 107 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 RNU6-837P-201ENST00000391056 108 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 MIR942-201ENST00000401111 86 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 MTND2P8-201ENST00000450555 1025 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 SCARNA3-201ENST00000517097 143 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 AL591926.4-201ENST00000616895 298 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CHD7Q9P2D1 SNORD115-3-201ENST00000363100 82 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 RNU6-414P-201ENST00000363705 104 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 SNORD1A-201ENST00000364968 72 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 AC114482.1-201ENST00000418010 247 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 SNRPEP9-201ENST00000436794 238 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 LARP1BP2-201ENST00000486594 519 ntBASIC-0.24□□□□□ -2.45
CHD7Q9P2D1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms