Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 BNIP3P25-201ENST00000596023 559 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC091834.1-201ENST00000614543 472 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 RMST_4.1-201ENST00000616886 107 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC009159.2-201ENST00000617603 606 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 ZNF355P-201ENST00000427301 3216 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 RNU6-1164P-201ENST00000364428 107 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 U3.12-201ENST00000364498 214 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 RNU6-169P-201ENST00000365336 107 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 RNU6-387P-201ENST00000411331 105 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 SRIP3-201ENST00000413200 219 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 RPS15AP10-201ENST00000432472 382 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 RPL30P1-201ENST00000488676 339 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC005178.1-201ENST00000508392 440 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 MTCYBP40-201ENST00000509390 1135 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 RNU2-46P-201ENST00000517038 113 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 AP005435.4-201ENST00000529514 284 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 EIF4BP1-201ENST00000554881 351 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC073539.2-201ENST00000597113 165 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AL133173.2-201ENST00000614270 90 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 AC063943.3-201ENST00000615562 356 ntBASIC1.56□□□□□ -2.16
CCDC59Q9P031 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC59Q9P031 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC59Q9P031 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 RNU5E-7P-201ENST00000365290 117 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 Y_RNA.576-201ENST00000384781 102 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 Y_RNA.597-201ENST00000410463 100 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 RN7SKP284-201ENST00000411002 343 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 VN1R36P-201ENST00000414936 291 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC007969.2-201ENST00000441891 191 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 RPL39P29-201ENST00000447779 157 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AL122001.1-201ENST00000457027 370 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 RPL30P6-201ENST00000475925 342 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC107393.1-201ENST00000512403 346 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 FABP5P5-201ENST00000515537 406 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 MIR548AB-201ENST00000584917 84 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC091135.1-201ENST00000585943 307 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 AL136363.2-201ENST00000604173 851 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.55□□□□□ -2.16
CCDC59Q9P031 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCDC59Q9P031 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC59Q9P031 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC59Q9P031 MIR208A-201ENST00000362287 71 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 RNU6-116P-201ENST00000384042 109 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 AL023284.1-201ENST00000403956 276 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AC087884.1-201ENST00000469738 328 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 RNU6-1129P-201ENST00000515964 104 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 RN7SKP265-201ENST00000516448 223 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC59Q9P031 AC022254.1-201ENST00000567857 235 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 SEPT7P9-203ENST00000604116 343 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AC131159.1-201ENST00000621854 213 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 AC138649.3-201ENST00000622154 254 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.54□□□□□ -2.16
CCDC59Q9P031 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC59Q9P031 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC59Q9P031 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC59Q9P031 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU1-58P-201ENST00000362413 163 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU6-527P-201ENST00000363425 104 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 SNORD115-7-201ENST00000365306 82 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU2-3P-201ENST00000410144 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU4-53P-201ENST00000410828 140 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNA5SP501-201ENST00000410990 112 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU6-607P-201ENST00000411283 108 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 HIGD1AP15-201ENST00000416198 280 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms