Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU2-20P-201ENST00000410425 191 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AC017079.2-201ENST00000416102 485 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 AL513124.1-201ENST00000450410 614 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 RPL37P6-201ENST00000460682 294 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AL049873.1-201ENST00000480540 376 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AC093663.1-201ENST00000497190 394 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 SNORA31.20-201ENST00000517111 133 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 MIR5696-201ENST00000578474 85 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AL365265.1-201ENST00000621045 234 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 U6.92-201ENST00000636464 89 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG3Q9NT62 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG3Q9NT62 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG3Q9NT62 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
ATG3Q9NT62 Y_RNA.143-201ENST00000363520 106 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU6-1317P-201ENST00000364582 104 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU6-81P-201ENST00000365608 104 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU6-607P-201ENST00000411283 108 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 AL445305.1-201ENST00000432577 575 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 AC234775.1-201ENST00000454247 670 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 AP001486.1-201ENST00000463339 476 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 AC023141.12-201ENST00000512399 199 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU7-200P-201ENST00000516105 62 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU6-1095P-201ENST00000516148 108 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 RNU1-103P-201ENST00000516502 125 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 LRRC37A5P-203ENST00000580181 585 ntBASIC4.6□□□□□ -1.67
ATG3Q9NT62 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG3Q9NT62 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG3Q9NT62 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG3Q9NT62 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
ATG3Q9NT62 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG3Q9NT62 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG3Q9NT62 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG3Q9NT62 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG3Q9NT62 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG3Q9NT62 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 SNORA38.1-201ENST00000364172 131 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 RNA5SP189-201ENST00000364920 115 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 MIR135A2-201ENST00000384854 100 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 RPS15AP6-201ENST00000420703 385 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG3Q9NT62 SNRPGP5-201ENST00000456003 220 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 AC010285.1-201ENST00000470580 392 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 PHBP14-201ENST00000512887 367 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 SNORA31.3-201ENST00000516029 96 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 IGKV2-26-201ENST00000518305 343 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 SNRPGP16-201ENST00000533275 226 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 LINC02555-201ENST00000563933 1951 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 AC008962.1-201ENST00000605729 304 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 U2.14-201ENST00000615943 113 ntBASIC4.59□□□□□ -1.67
ATG3Q9NT62 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG3Q9NT62 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG3Q9NT62 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG3Q9NT62 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG3Q9NT62 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG3Q9NT62 RNU6-858P-201ENST00000362436 107 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 SNORA31-201ENST00000362607 130 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 RNU6-102P-201ENST00000384485 104 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 Y_RNA.581-201ENST00000391017 97 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 RNU6-700P-201ENST00000391043 107 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 Y_RNA.626-201ENST00000411288 95 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 SETP5-201ENST00000437270 562 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 RN7SKP209-201ENST00000516888 304 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 AP004242.1-201ENST00000533701 349 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 SYF2P1-201ENST00000550658 413 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 MIR4644-201ENST00000579929 84 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 MIR5692A1-201ENST00000580523 69 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 AC004825.2-201ENST00000616634 455 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG3Q9NT62 AC010733.2-201ENST00000589496 5702 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG3Q9NT62 AC004925.1-201ENST00000624256 2706 ntBASIC4.58□□□□□ -1.68
ATG3Q9NT62 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms