Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC008521.1-201ENST00000587471 187 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC008751.2-201ENST00000597885 980 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC078795.2-201ENST00000602835 1252 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC138749.5-201ENST00000611461 208 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC116165.2-201ENST00000616705 206 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
LRRC40Q9H9A6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 SNORD114-1-201ENST00000362705 72 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RNU6-371P-201ENST00000364283 108 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 MIR597-201ENST00000384968 97 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RAP1BP3-201ENST00000407180 549 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RN7SKP284-201ENST00000411002 343 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 BTF3L4P1-201ENST00000413813 468 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 SNORD11.1-201ENST00000459482 85 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 MTND2P14-201ENST00000482139 351 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RPL23AP94-201ENST00000512518 302 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RNU1-86P-201ENST00000516108 154 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 RNU1-107P-201ENST00000516617 154 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 GNAI2P1-201ENST00000541815 315 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AC018630.3-201ENST00000542637 96 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 HMGN1P30-201ENST00000589286 268 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AL022345.1-201ENST00000607292 135 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 AC063943.3-201ENST00000615562 356 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 U1.36-201ENST00000620684 176 ntBASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
LRRC40Q9H9A6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RNA5SP126-201ENST00000365092 109 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 MIR1294-201ENST00000408503 142 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 POLHP1-201ENST00000411806 470 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 C1DP2-201ENST00000418167 426 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 EIF4EP2-201ENST00000422816 654 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 UBE2V1P4-201ENST00000425374 344 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 USP9YP12-201ENST00000450481 570 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RPL30P1-201ENST00000488676 339 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RNU1-41P-201ENST00000516161 162 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RNU1-48P-201ENST00000516400 162 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 AC091834.1-201ENST00000614543 472 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 AC022960.3-201ENST00000619794 441 ntBASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LRRC40Q9H9A6 RNU1-58P-201ENST00000362413 163 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNU6-1214P-201ENST00000363650 109 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNY1P12-201ENST00000364251 105 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNU4-28P-201ENST00000364739 141 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNU5E-5P-201ENST00000365379 116 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNU6-61P-201ENST00000365528 109 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 Y_RNA.597-201ENST00000410463 100 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 OR9R1P-201ENST00000412200 877 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 EEF1A1P40-201ENST00000412883 573 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RPL32P28-201ENST00000443577 397 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 AL136380.1-201ENST00000447970 162 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RPL30P6-201ENST00000475925 342 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RPL21P99-201ENST00000480369 423 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 MTCO3P9-201ENST00000506989 781 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 EEF1A1P37-201ENST00000522748 715 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 AC112191.3-201ENST00000604371 277 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 AL159153.1-201ENST00000619688 317 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 RMST_7.1-201ENST00000621935 268 ntBASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LRRC40Q9H9A6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 AL356583.2-201ENST00000426536 280 ntBASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 RPL39P29-201ENST00000447779 157 ntBASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 ZNF114P1-201ENST00000453500 292 ntBASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
LRRC40Q9H9A6 MTND2P33-201ENST00000506452 1031 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms