Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNU6-540P-201ENST00000384622 101 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 MIR184-201ENST00000384962 84 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SNORD115-45-201ENST00000391078 81 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RN7SKP285-201ENST00000410137 318 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU2-32P-201ENST00000411193 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL645937.1-202ENST00000421799 937 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC011742.1-201ENST00000431448 434 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC092162.1-201ENST00000432828 434 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC073587.1-201ENST00000447093 876 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 MIR4680-201ENST00000580906 66 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 MIR3171-201ENST00000584270 74 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.31-201ENST00000362574 102 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-778P-201ENST00000363269 103 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.163-201ENST00000363702 113 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU1-63P-201ENST00000383902 164 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-348P-201ENST00000384386 107 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SNORA74C-2-201ENST00000411179 201 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU2-6P-201ENST00000411404 190 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RPL21P10-201ENST00000463521 490 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC024451.1-201ENST00000508013 779 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC009852.2-201ENST00000567898 485 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SEPT14P17-201ENST00000617978 177 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL669831.3-213ENST00000636676 183 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-1169P-201ENST00000363537 103 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SNORD116-11-201ENST00000383882 92 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-1158P-201ENST00000391167 107 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 BTF3P7-201ENST00000407097 488 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU4-26P-201ENST00000410270 107 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 PSMA2P3-201ENST00000429685 675 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 HMGB1P12-201ENST00000438594 598 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RPS15AP7-201ENST00000439294 405 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL121914.1-201ENST00000450188 156 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL137159.1-201ENST00000452808 512 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC021660.1-201ENST00000465006 554 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC108210.2-201ENST00000503681 201 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL512310.1-201ENST00000548639 172 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 MIR4490-201ENST00000582647 84 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL161798.1-201ENST00000604630 131 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC022202.1-201ENST00000613515 211 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC092376.2-201ENST00000622621 4116 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-478P-201ENST00000363904 110 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.217-201ENST00000364214 105 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNA5SP151-201ENST00000365632 117 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-1157P-201ENST00000384456 106 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU2-2P-201ENST00000410396 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-1328P-201ENST00000410938 106 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 DAP3P1-201ENST00000441522 278 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.641-201ENST00000459414 105 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC023790.1-201ENST00000482174 347 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU2-27P-201ENST00000516185 142 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RN7SKP96-201ENST00000516948 297 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU6-250P-201ENST00000516958 103 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC022884.3-201ENST00000579571 248 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AL356575.1-201ENST00000603008 283 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 AC007938.3-201ENST00000604965 623 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms