Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MIR4513-201ENST00000581077 86 ntBASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 AC011712.1-201ENST00000588959 234 ntBASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 AC009248.2-201ENST00000619826 254 ntBASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 AC099654.14-201ENST00000638599 341 ntBASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SH3KBP1Q96B97 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNU5E-7P-201ENST00000365290 117 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 SNORD116-20-201ENST00000384529 92 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNU6-831P-201ENST00000384548 107 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNU6-19P-201ENST00000384718 107 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC006026.2-201ENST00000457376 180 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AL441985.1-201ENST00000457727 251 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RPL23AP45-201ENST00000476406 468 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RPL7P43-201ENST00000478876 753 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC008628.2-201ENST00000502605 298 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 MTCO2P30-201ENST00000503662 364 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 FAM206BP-201ENST00000510179 541 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNU4-49P-201ENST00000516080 140 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC104576.1-201ENST00000524225 88 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AP004607.1-201ENST00000524456 203 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 PSMA3P-201ENST00000555485 635 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 LARP7P3-201ENST00000579888 337 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 MIR3117-201ENST00000584034 78 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC091152.3-201ENST00000604227 325 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 AC097372.5-201ENST00000623665 376 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 Z69720.2-201ENST00000624755 279 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 SCARNA4-202ENST00000625402 129 ntBASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SH3KBP1Q96B97 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 CBX3P1-201ENST00000325243 554 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 RNU6-942P-201ENST00000363002 107 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 RNU6-254P-201ENST00000363377 107 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 Y_RNA.303-201ENST00000364998 94 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 USP9YP20-201ENST00000419224 558 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 PTGES3P4-201ENST00000426243 356 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 SUMO1P4-201ENST00000429430 302 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 RPS12P18-201ENST00000442381 270 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 RPL7P12-201ENST00000446719 750 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 GZMAP1-201ENST00000503054 631 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AC010486.1-201ENST00000511793 424 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 MIR3124-201ENST00000582636 67 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 MIR3942-201ENST00000585264 109 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 MIR7515-201ENST00000637837 67 ntBASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
SH3KBP1Q96B97 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SH3KBP1Q96B97 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC121333.1-201ENST00000567488 2709 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RNU6-78P-201ENST00000362897 107 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RNU6-428P-201ENST00000362942 107 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 VTRNA1-1-201ENST00000363120 99 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 Y_RNA.100-201ENST00000363141 102 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RNU6-827P-201ENST00000365553 106 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 Y_RNA.414-201ENST00000384011 101 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 SNORA44-201ENST00000384584 132 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 Y_RNA.530-201ENST00000384587 101 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 MIR147B-201ENST00000390185 80 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 SNORD56-201ENST00000413522 71 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC138393.2-201ENST00000414742 246 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 NDUFA5P4-201ENST00000436704 385 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AL353572.1-201ENST00000442490 417 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms