Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL357075.1-201ENST00000404107 726 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 RPS26P47-201ENST00000427219 348 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 GOT2P5-201ENST00000433995 546 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AC096638.1-201ENST00000444678 216 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AL358232.1-201ENST00000448030 501 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 RNU7-143P-201ENST00000516781 65 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AC233702.2-202ENST00000562547 291 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 MIR3684-201ENST00000579779 74 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AL121772.2-201ENST00000614331 297 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 PHKBP1-201ENST00000450951 1951 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 AC010332.2-201ENST00000613083 1904 ntBASIC4.21□□□□□ -1.74
SHKBP1Q8TBC3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 SNORA71.3-201ENST00000362582 128 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 SNORD35B-201ENST00000363660 87 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-961P-201ENST00000363893 105 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-151P-201ENST00000364158 107 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.412-201ENST00000384001 104 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 UBA52P6-201ENST00000399822 382 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 CR769767.1-201ENST00000436337 346 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 SEPT7P4-201ENST00000437076 306 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RPS4XP22-201ENST00000480755 780 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-1333P-201ENST00000516162 93 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RN7SKP234-201ENST00000517173 224 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 SUMO2P18-201ENST00000518873 252 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 MIR4716-201ENST00000579628 84 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 AC002545.1-201ENST00000592511 181 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 MIR6075-201ENST00000620782 95 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 AC006001.4-201ENST00000622243 395 ntBASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHKBP1Q8TBC3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.7-201ENST00000362352 102 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.331-201ENST00000365267 102 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 RNU5E-7P-201ENST00000365290 117 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.357-201ENST00000365487 109 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-211P-201ENST00000384047 107 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 SNORA40-201ENST00000388090 126 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AC091390.3-201ENST00000426478 338 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 CYCSP32-201ENST00000440548 321 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AL353705.4-201ENST00000449661 238 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 YWHAEP4-201ENST00000505390 198 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AC009541.1-201ENST00000438279 2662 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 OR4G2P-202ENST00000641004 1759 ntBASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.19□□□□□ -1.74
SHKBP1Q8TBC3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC087190.4-201ENST00000574616 8334 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-1298P-201ENST00000362456 101 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms