Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RPL21P9-201ENST00000556149 474 ntBASIC4.6□□□□□ -1.67
SIX5Q8N196 MIR4282-201ENST00000583613 67 ntBASIC4.6□□□□□ -1.67
SIX5Q8N196 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.6□□□□□ -1.67
SIX5Q8N196 MIR8059-201ENST00000620427 81 ntBASIC4.6□□□□□ -1.67
SIX5Q8N196 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.6□□□□□ -1.67
SIX5Q8N196 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX5Q8N196 AC092435.4-201ENST00000623012 4159 ntBASIC4.6□□□□□ -1.67
SIX5Q8N196 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.6□□□□□ -1.67
SIX5Q8N196 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SIX5Q8N196 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SIX5Q8N196 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX5Q8N196 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX5Q8N196 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX5Q8N196 RNA5SP502-201ENST00000362694 119 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 RNA5SP513-201ENST00000364648 118 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 RNU4-56P-201ENST00000364700 142 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 Y_RNA.333-201ENST00000365274 102 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AL133412.1-201ENST00000380194 2992 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 EI24P2-201ENST00000397776 1076 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC009237.10-201ENST00000414112 510 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 BPY2DP-201ENST00000422208 265 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC019205.3-201ENST00000424573 156 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 RNU6-625P-201ENST00000459412 107 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC074198.2-201ENST00000508153 258 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX5Q8N196 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC115990.1-201ENST00000526957 301 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX5Q8N196 TRAV8-5-201ENST00000537369 341 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC006199.1-201ENST00000548728 219 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC090897.2-201ENST00000581715 130 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC004825.2-201ENST00000616634 455 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 AC073349.3-201ENST00000617616 186 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 uc_338.13-201ENST00000618243 179 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SIX5Q8N196 AC132825.6-201ENST00000638861 357 ntBASIC4.59□□□□□ -1.67
SIX5Q8N196 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 RBBP8P1-201ENST00000449447 1844 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 MIR331-201ENST00000362302 94 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 Y_RNA.179-201ENST00000363844 90 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 RNU6-487P-201ENST00000365430 104 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 MIR320B2-201ENST00000408479 138 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 RNU6-1140P-201ENST00000410517 106 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 RNA5SP146-201ENST00000410743 123 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AC069285.2-201ENST00000440210 275 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX5Q8N196 TMSB4XP3-201ENST00000445144 114 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX5Q8N196 BTF3P6-201ENST00000448054 499 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AL162151.2-201ENST00000448875 158 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 SNRPGP5-201ENST00000456003 220 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 RNA5SP310-201ENST00000459084 116 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 AC006445.2-201ENST00000510061 472 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX5Q8N196 TVP23BP1-201ENST00000557500 617 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 MTND6P33-201ENST00000571794 183 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 MIR3944-201ENST00000581277 108 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 MIR6867-201ENST00000610636 67 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX5Q8N196 AL110115.1-201ENST00000614396 364 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AL590240.4-201ENST00000616908 390 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 MIR6875-201ENST00000617506 72 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX5Q8N196 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX5Q8N196 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.58□□□□□ -1.68
SIX5Q8N196 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
SIX5Q8N196 MTND5P35-201ENST00000557537 1720 ntBASIC4.58□□□□□ -1.68
SIX5Q8N196 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX5Q8N196 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 ZNF204P-201ENST00000416749 2397 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX5Q8N196 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
SIX5Q8N196 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX5Q8N196 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX5Q8N196 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX5Q8N196 SNORA71.3-201ENST00000362582 128 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 RNU6-1285P-201ENST00000363480 105 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 SNORD46.1-201ENST00000364139 104 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 SNORA26.3-201ENST00000391119 136 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AC005300.1-201ENST00000428401 373 ntBASIC4.57□□□□□ -1.68
SIX5Q8N196 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX5Q8N196 AP000705.1-201ENST00000454567 350 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms