Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 OR56A5-201ENST00000340110 738 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 SNORD27-201ENST00000363981 72 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RNU6-1317P-201ENST00000364582 104 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RNA5SP51-201ENST00000364750 119 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RNU6-384P-201ENST00000364900 104 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RNU6-356P-201ENST00000384140 107 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 SNORA36C-201ENST00000384289 132 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 SNORA19-201ENST00000384737 128 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RN7SKP53-201ENST00000411337 315 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 ATP5A1P2-201ENST00000412323 255 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AL137014.1-201ENST00000420490 1226 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 CKS1BP5-201ENST00000434172 273 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 DAP3P1-201ENST00000441522 278 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AL121871.1-201ENST00000443413 436 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 RNA5SP217-201ENST00000515959 91 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC007458.1-201ENST00000542812 373 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC004584.2-201ENST00000570407 410 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 VN1R91P-201ENST00000594377 169 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AL591516.1-201ENST00000611326 274 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 MIR6810-201ENST00000622701 70 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 AC130454.1-201ENST00000622948 401 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 MIR4496-201ENST00000635896 61 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 Z99571.1-201ENST00000636677 394 ntBASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GFI1BQ5VTD9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 Y_RNA.20-201ENST00000362479 113 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 SNORD9-201ENST00000362566 104 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RNU6-212P-201ENST00000362642 104 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 Y_RNA.84-201ENST00000363011 104 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 snoU2_19.2-201ENST00000363024 80 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RNA5SP515-201ENST00000364570 118 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RNU6-76P-201ENST00000384060 104 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 SNORA46-201ENST00000384762 135 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RNU6-882P-201ENST00000391025 103 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 PCNPP3-201ENST00000393579 471 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AL592148.1-201ENST00000413568 445 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 EIF4EP2-201ENST00000422816 654 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 PIGPP3-201ENST00000425307 415 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC091390.1-201ENST00000433904 331 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 HSPD1P21-201ENST00000436541 245 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 UQCRHP3-201ENST00000451503 251 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 TRBVB-201ENST00000477100 408 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 SNORA70.18-201ENST00000516696 98 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RNU4-60P-201ENST00000517239 135 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 MIR548AC-201ENST00000585049 88 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AC009779.6-201ENST00000603972 165 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 FTX_2.1-201ENST00000618816 94 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 U4.6-201ENST00000621618 127 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 AL360181.4-201ENST00000621752 134 ntBASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.59□□□□□ -1.99
GFI1BQ5VTD9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.59□□□□□ -2
GFI1BQ5VTD9 AC002546.1-201ENST00000588041 2504 ntBASIC2.59□□□□□ -2
GFI1BQ5VTD9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
GFI1BQ5VTD9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNU6-512P-201ENST00000364438 103 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 Y_RNA.237-201ENST00000364439 102 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 Y_RNA.515-201ENST00000384535 112 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNU6-33P-201ENST00000384793 107 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNA5SP44-201ENST00000410446 133 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNU6-1203P-201ENST00000410703 110 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AL035423.1-201ENST00000420331 213 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC091390.3-201ENST00000426478 338 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 MTATP6P4-201ENST00000427725 675 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC092423.1-201ENST00000430165 186 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms