Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX4Q06945 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX4Q06945 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX4Q06945 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX4Q06945 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
SOX4Q06945 U1.1-201ENST00000384101 164 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RNU6-20P-201ENST00000384106 107 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RNU6-1117P-201ENST00000384525 104 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 Y_RNA.570-201ENST00000384750 101 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 U3.37-201ENST00000408528 213 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 SNORA3C-201ENST00000408792 125 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX4Q06945 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.21□□□□□ -1.74
SOX4Q06945 RN7SL271P-201ENST00000487601 295 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC006499.6-201ENST00000511169 607 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RNU6-1219P-201ENST00000516143 112 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RNU6-567P-201ENST00000516746 107 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX4Q06945 AC107016.1-201ENST00000550463 337 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RPL21P9-201ENST00000556149 474 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 MIR4429-201ENST00000580105 73 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC073349.3-201ENST00000617616 186 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC112200.1-201ENST00000625015 234 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX4Q06945 IGHVIII-44-202ENST00000636235 289 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 AC012442.3-202ENST00000636742 206 ntBASIC4.21□□□□□ -1.74
SOX4Q06945 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX4Q06945 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX4Q06945 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX4Q06945 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX4Q06945 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX4Q06945 Y_RNA.308-201ENST00000365043 101 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 U3.15-201ENST00000365398 212 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX4Q06945 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 SNORA29-201ENST00000384183 140 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 RNU6-281P-201ENST00000384212 103 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 MIR1251-201ENST00000408552 70 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 RN7SKP156-201ENST00000410308 342 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 AL160275.2-201ENST00000412010 394 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 AL390729.2-201ENST00000416137 156 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 RPS12P23-201ENST00000419579 400 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 WARS2P1-201ENST00000429678 537 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 AC243964.1-201ENST00000441814 261 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 AC007395.1-201ENST00000451333 677 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 SNORD2.1-201ENST00000458762 69 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 RPL21P129-201ENST00000491732 478 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 AC091874.1-201ENST00000511402 339 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 CYCSP30-201ENST00000546447 172 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX4Q06945 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX4Q06945 AC136601.2-201ENST00000604356 474 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 AC108706.1-201ENST00000611053 297 ntBASIC4.2□□□□□ -1.74
SOX4Q06945 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SOX4Q06945 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX4Q06945 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX4Q06945 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX4Q06945 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX4Q06945 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX4Q06945 Y_RNA.136-201ENST00000363444 102 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 RNU6-1175P-201ENST00000365200 107 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 Y_RNA.435-201ENST00000384095 112 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 MIR10B-201ENST00000385011 110 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 SNORA46.1-201ENST00000391069 153 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 RPL23AP36-201ENST00000413895 458 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AL590383.1-201ENST00000428602 75 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 SNRPEP9-201ENST00000436794 238 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX4Q06945 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX4Q06945 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX4Q06945 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX4Q06945 AL451050.1-201ENST00000450126 415 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AL645939.1-201ENST00000453429 797 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AC006026.2-201ENST00000457376 180 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 snoU13.24-201ENST00000458998 104 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 RPL31P61-201ENST00000496160 376 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 UBE2CP3-201ENST00000502715 450 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 HMGB1P22-201ENST00000505315 124 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 TRAV28-201ENST00000557548 323 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX4Q06945 CYCSP39-201ENST00000565821 309 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX4Q06945 MIR5695-201ENST00000579717 85 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 MIR4308-201ENST00000580634 81 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 KLKP1-201ENST00000595979 403 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX4Q06945 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SOX4Q06945 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX4Q06945 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms