Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AP000907.2-201ENST00000530827 353 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.95□□□□□ -2.26
SPCS3P61009 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SPCS3P61009 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.95□□□□□ -2.26
SPCS3P61009 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SPCS3P61009 MTND3P13-201ENST00000574391 343 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 NIFKP6-201ENST00000598115 845 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC022022.2-201ENST00000602989 360 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC245297.2-201ENST00000610119 565 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 AC091948.2-201ENST00000636510 279 ntBASIC0.95□□□□□ -2.26
SPCS3P61009 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SPCS3P61009 SNORD33-201ENST00000362761 85 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 RNU6-560P-201ENST00000364007 108 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 SMIM11P1-201ENST00000369586 178 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 Y_RNA.623-201ENST00000411128 95 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AL589872.1-201ENST00000426602 288 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.94□□□□□ -2.26
SPCS3P61009 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.94□□□□□ -2.26
SPCS3P61009 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SPCS3P61009 AL139824.2-201ENST00000458731 1095 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 RNU6-333P-201ENST00000459117 107 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 SNORA59A-201ENST00000459326 152 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AL133373.1-201ENST00000497098 94 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.94□□□□□ -2.26
SPCS3P61009 RNU6-677P-201ENST00000516914 101 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.94□□□□□ -2.26
SPCS3P61009 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.94□□□□□ -2.26
SPCS3P61009 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.94□□□□□ -2.26
SPCS3P61009 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.94□□□□□ -2.26
SPCS3P61009 AC090115.3-201ENST00000553218 849 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.94□□□□□ -2.26
SPCS3P61009 MIR4303-201ENST00000581299 66 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AC023043.2-201ENST00000589678 1026 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AC130324.3-201ENST00000614165 542 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 AL589994.2-201ENST00000621124 579 ntBASIC0.94□□□□□ -2.26
SPCS3P61009 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SPCS3P61009 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SPCS3P61009 RNA5SP327-201ENST00000362494 101 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 RNU4-91P-201ENST00000364778 135 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 SNORD116-20-201ENST00000384529 92 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.93□□□□□ -2.26
SPCS3P61009 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.93□□□□□ -2.26
SPCS3P61009 snoU109.2-201ENST00000459316 135 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 snoU13.26-201ENST00000459452 105 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AC009646.1-201ENST00000510455 318 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 MIR4421-201ENST00000578133 69 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AL158827.2-201ENST00000602494 330 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AC112220.2-201ENST00000605513 533 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AC024060.1-201ENST00000607052 494 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AC063943.3-201ENST00000615562 356 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AL159153.1-201ENST00000619688 317 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 AC007792.1-201ENST00000623023 402 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.93□□□□□ -2.26
SPCS3P61009 AL691447.3-201ENST00000635020 330 ntBASIC0.93□□□□□ -2.26
SPCS3P61009 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SPCS3P61009 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SPCS3P61009 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SPCS3P61009 RNU6-360P-201ENST00000390944 104 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.92□□□□□ -2.26
SPCS3P61009 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.92□□□□□ -2.26
SPCS3P61009 C8orf59P1-201ENST00000429930 303 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 CALM1P1-201ENST00000442082 433 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AL022238.1-201ENST00000442557 355 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 GDI2P2-201ENST00000445131 608 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AC093899.1-201ENST00000457984 376 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 RNU1-131P-201ENST00000458943 161 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.92□□□□□ -2.26
SPCS3P61009 RPL23AP94-201ENST00000512518 302 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 RNA5SP216-201ENST00000516111 123 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.92□□□□□ -2.26
SPCS3P61009 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.92□□□□□ -2.26
SPCS3P61009 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
SPCS3P61009 DNAJC19P9-201ENST00000555084 351 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 MIR5094-201ENST00000578766 85 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AL596327.1-201ENST00000603629 213 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AP000654.2-201ENST00000605633 586 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AC025754.2-201ENST00000606491 432 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 MIR15A-201ENST00000607334 83 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AC124016.2-201ENST00000610058 665 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AL512598.1-201ENST00000610158 273 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AL512427.1-201ENST00000618593 349 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 AC120349.3-201ENST00000624377 529 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 LINC02555-201ENST00000563933 1951 ntBASIC0.92□□□□□ -2.26
SPCS3P61009 RNU6-462P-201ENST00000362659 105 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 VPS26BP1-201ENST00000417155 755 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 OOSP1P1-201ENST00000423265 274 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 AC092648.1-201ENST00000425870 423 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 AL627311.1-201ENST00000431514 115 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 TIMM9P1-201ENST00000436122 256 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 KATNBL1P3-201ENST00000443475 909 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.91□□□□□ -2.26
SPCS3P61009 RN7SKP210-201ENST00000459176 261 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
SPCS3P61009 AC079395.1-201ENST00000510981 262 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 SNORA3.4-201ENST00000515969 96 ntBASIC0.91□□□□□ -2.26
SPCS3P61009 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms