Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NCKAP1LP55160 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NCKAP1LP55160 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 RNU6-187P-201ENST00000384139 106 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 Y_RNA.541-201ENST00000384640 113 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 MIR153-1-201ENST00000384914 90 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 RNU6-1025P-201ENST00000410629 104 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 RN7SKP53-201ENST00000411337 315 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 MTCO1P39-201ENST00000426148 480 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC091286.1-201ENST00000431233 461 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 FABP5P15-201ENST00000453566 214 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 SNORD108-201ENST00000459332 71 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC084357.1-201ENST00000473404 255 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC109479.2-201ENST00000517842 174 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC007458.1-201ENST00000542812 373 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC093023.1-201ENST00000547375 507 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 MIR4643-201ENST00000577473 78 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 MIR3133-201ENST00000583157 78 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 SRGNP1-201ENST00000603392 451 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AP003355.3-201ENST00000623465 114 ntBASIC3.92□□□□□ -1.78
NCKAP1LP55160 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.92□□□□□ -1.78
NCKAP1LP55160 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NCKAP1LP55160 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NCKAP1LP55160 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NCKAP1LP55160 AC006504.1-201ENST00000562493 3666 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 Y_RNA.16-201ENST00000362421 102 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 RNU6-125P-201ENST00000384505 107 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 RN7SKP27-201ENST00000410684 333 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 TMEM167AP1-201ENST00000423409 219 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 AL445305.1-201ENST00000432577 575 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 CKS1BP5-201ENST00000434172 273 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 RNU6-612P-201ENST00000516909 102 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 AC112200.1-201ENST00000625015 234 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.91□□□□□ -1.78
NCKAP1LP55160 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NCKAP1LP55160 AC073073.2-201ENST00000609827 2578 ntBASIC3.91□□□□□ -1.78
NCKAP1LP55160 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NCKAP1LP55160 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NCKAP1LP55160 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
NCKAP1LP55160 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NCKAP1LP55160 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NCKAP1LP55160 CEP170P1-201ENST00000502249 4587 ntBASIC3.9□□□□□ -1.78
NCKAP1LP55160 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NCKAP1LP55160 Y_RNA.83-201ENST00000363005 113 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 AC017079.2-201ENST00000416102 485 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 RNU6-1012P-201ENST00000516606 109 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 RNU4-60P-201ENST00000517239 135 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 IGKV2D-19-201ENST00000523346 262 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 AL161629.2-201ENST00000615347 275 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.79
NCKAP1LP55160 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NCKAP1LP55160 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NCKAP1LP55160 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NCKAP1LP55160 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NCKAP1LP55160 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
NCKAP1LP55160 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
NCKAP1LP55160 AL365440.1-201ENST00000436135 2167 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.89□□□□□ -1.79
NCKAP1LP55160 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NCKAP1LP55160 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NCKAP1LP55160 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.89□□□□□ -1.79
NCKAP1LP55160 Y_RNA.54-201ENST00000362766 105 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 Y_RNA.358-201ENST00000365491 99 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 MIR514A1-201ENST00000385133 98 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NCKAP1LP55160 Y_RNA.623-201ENST00000411128 95 ntBASIC3.89□□□□□ -1.79
NCKAP1LP55160 Y_RNA.793-201ENST00000411222 111 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms