Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP11P51784 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
USP11P51784 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP11P51784 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.37□□□□□ -1.71
USP11P51784 SDAD1P2-201ENST00000441308 2028 ntBASIC4.36□□□□□ -1.71
USP11P51784 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP11P51784 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP11P51784 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP11P51784 RNU6-326P-201ENST00000365480 107 ntBASIC4.36□□□□□ -1.71
USP11P51784 RNU6-926P-201ENST00000384075 107 ntBASIC4.36□□□□□ -1.71
USP11P51784 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP11P51784 RNU6-918P-201ENST00000391219 106 ntBASIC4.36□□□□□ -1.71
USP11P51784 Z85995.1-201ENST00000415547 335 ntBASIC4.36□□□□□ -1.71
USP11P51784 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.36□□□□□ -1.71
USP11P51784 AC005002.2-201ENST00000438228 269 ntBASIC4.36□□□□□ -1.71
USP11P51784 snoU13.30-201ENST00000458951 104 ntBASIC4.36□□□□□ -1.71
USP11P51784 AC139453.3-201ENST00000493276 369 ntBASIC4.36□□□□□ -1.71
USP11P51784 Y_RNA.662-201ENST00000516028 97 ntBASIC4.36□□□□□ -1.71
USP11P51784 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.36□□□□□ -1.71
USP11P51784 MRPS18CP4-201ENST00000535821 231 ntBASIC4.36□□□□□ -1.71
USP11P51784 AC090877.1-201ENST00000561418 344 ntBASIC4.36□□□□□ -1.71
USP11P51784 AC006130.2-201ENST00000586202 326 ntBASIC4.36□□□□□ -1.71
USP11P51784 AL078605.1-201ENST00000603529 500 ntBASIC4.36□□□□□ -1.71
USP11P51784 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP11P51784 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.36□□□□□ -1.71
USP11P51784 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
USP11P51784 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.35□□□□□ -1.71
USP11P51784 Y_RNA.240-201ENST00000364469 95 ntBASIC4.35□□□□□ -1.71
USP11P51784 RNA5SP235-201ENST00000365411 114 ntBASIC4.35□□□□□ -1.71
USP11P51784 SNORA40C-201ENST00000391285 128 ntBASIC4.35□□□□□ -1.71
USP11P51784 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.35□□□□□ -1.71
USP11P51784 AL356535.1-201ENST00000440335 398 ntBASIC4.35□□□□□ -1.71
USP11P51784 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.35□□□□□ -1.71
USP11P51784 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.35□□□□□ -1.71
USP11P51784 RNU6-377P-201ENST00000515965 102 ntBASIC4.35□□□□□ -1.71
USP11P51784 RNU2-31P-201ENST00000516954 155 ntBASIC4.35□□□□□ -1.71
USP11P51784 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.35□□□□□ -1.71
USP11P51784 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.35□□□□□ -1.71
USP11P51784 AC104465.1-201ENST00000611365 139 ntBASIC4.35□□□□□ -1.71
USP11P51784 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
USP11P51784 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP11P51784 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP11P51784 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP11P51784 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP11P51784 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
USP11P51784 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP11P51784 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP11P51784 Y_RNA.8-201ENST00000362353 102 ntBASIC4.34□□□□□ -1.71
USP11P51784 Y_RNA.233-201ENST00000364407 101 ntBASIC4.34□□□□□ -1.71
USP11P51784 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.34□□□□□ -1.71
USP11P51784 RNU6-166P-201ENST00000384371 107 ntBASIC4.34□□□□□ -1.71
USP11P51784 RNA5SP213-201ENST00000391031 106 ntBASIC4.34□□□□□ -1.71
USP11P51784 U3.39-201ENST00000408569 239 ntBASIC4.34□□□□□ -1.71
USP11P51784 RNU4-30P-201ENST00000410245 143 ntBASIC4.34□□□□□ -1.71
USP11P51784 RN7SKP202-201ENST00000410439 330 ntBASIC4.34□□□□□ -1.71
USP11P51784 AC016700.2-201ENST00000446011 156 ntBASIC4.34□□□□□ -1.71
USP11P51784 AC010265.1-201ENST00000513509 211 ntBASIC4.34□□□□□ -1.71
USP11P51784 AP004371.1-201ENST00000525240 214 ntBASIC4.34□□□□□ -1.71
USP11P51784 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.34□□□□□ -1.71
USP11P51784 SNORD84-203ENST00000584275 78 ntBASIC4.34□□□□□ -1.71
USP11P51784 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.34□□□□□ -1.71
USP11P51784 U4.7-201ENST00000638126 106 ntBASIC4.34□□□□□ -1.71
USP11P51784 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USP11P51784 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP11P51784 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
USP11P51784 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.33□□□□□ -1.72
USP11P51784 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.33□□□□□ -1.72
USP11P51784 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.33□□□□□ -1.72
USP11P51784 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP11P51784 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP11P51784 ZNF826P-207ENST00000622273 1910 ntBASIC4.33□□□□□ -1.72
USP11P51784 SNORD50B-201ENST00000364995 70 ntBASIC4.33□□□□□ -1.72
USP11P51784 Y_RNA.398-201ENST00000383952 99 ntBASIC4.33□□□□□ -1.72
USP11P51784 RNU6-629P-201ENST00000384061 103 ntBASIC4.33□□□□□ -1.72
USP11P51784 SNORA53-201ENST00000391141 249 ntBASIC4.33□□□□□ -1.72
USP11P51784 HLFP1-201ENST00000402375 499 ntBASIC4.33□□□□□ -1.72
USP11P51784 AC244098.2-201ENST00000422068 99 ntBASIC4.33□□□□□ -1.72
USP11P51784 AL591419.1-201ENST00000427423 339 ntBASIC4.33□□□□□ -1.72
USP11P51784 RN7SKP272-201ENST00000516988 232 ntBASIC4.33□□□□□ -1.72
USP11P51784 SNORA31.19-201ENST00000517079 126 ntBASIC4.33□□□□□ -1.72
USP11P51784 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.33□□□□□ -1.72
USP11P51784 MIR4429-201ENST00000580105 73 ntBASIC4.33□□□□□ -1.72
USP11P51784 AL137849.1-201ENST00000604767 169 ntBASIC4.33□□□□□ -1.72
USP11P51784 SNORD113-5-201ENST00000607261 78 ntBASIC4.33□□□□□ -1.72
USP11P51784 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.33□□□□□ -1.72
USP11P51784 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP11P51784 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.33□□□□□ -1.72
USP11P51784 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
USP11P51784 BX322639.1-202ENST00000423987 2213 ntBASIC4.33□□□□□ -1.72
USP11P51784 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
USP11P51784 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USP11P51784 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP11P51784 Y_RNA.275-201ENST00000364726 110 ntBASIC4.32□□□□□ -1.72
USP11P51784 RNU4-9P-201ENST00000364951 139 ntBASIC4.32□□□□□ -1.72
USP11P51784 SNORD6-201ENST00000365444 73 ntBASIC4.32□□□□□ -1.72
USP11P51784 RNU6-17P-201ENST00000384245 107 ntBASIC4.32□□□□□ -1.72
USP11P51784 RNU6-18P-201ENST00000384527 107 ntBASIC4.32□□□□□ -1.72
USP11P51784 RN7SKP156-201ENST00000410308 342 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms