Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC006362.1-201ENST00000567392 174 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC005261.5-201ENST00000596280 355 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC093648.1-201ENST00000623546 606 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AL512643.1-201ENST00000635735 524 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC110491.1-201ENST00000562191 2010 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXA9P31269 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 RNY1P12-201ENST00000364251 105 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 Y_RNA.359-201ENST00000365498 102 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-61P-201ENST00000365528 109 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-190P-201ENST00000384154 102 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-74P-201ENST00000384235 107 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-658P-201ENST00000384606 106 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 OR51A5P-201ENST00000415429 942 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RPS15AP9-201ENST00000439856 381 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC098831.1-201ENST00000440661 216 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 BRK1P2-201ENST00000442875 223 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 KATNBL1P3-201ENST00000443475 909 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 MTATP6P26-201ENST00000445926 662 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 Z83846.1-201ENST00000446798 265 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 HMGN2P10-201ENST00000448085 265 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RPL31P3-201ENST00000458430 332 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC080013.2-201ENST00000460866 323 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC117522.1-201ENST00000509821 380 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC098591.2-201ENST00000510152 315 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC079140.3-201ENST00000511111 550 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-123P-201ENST00000516163 102 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RNU6-143P-201ENST00000516942 93 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AP003072.2-201ENST00000527756 676 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC007375.1-201ENST00000554513 578 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC021739.1-201ENST00000559631 174 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC012213.3-201ENST00000577199 777 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 PIGPP4-201ENST00000584447 307 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC008521.1-201ENST00000587471 187 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 RN7SKP299-201ENST00000606679 301 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 MIR98-201ENST00000606724 119 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC069294.1-201ENST00000608397 350 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC006566.1-201ENST00000608943 513 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC099842.1-201ENST00000619919 596 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 AC090582.1-201ENST00000636321 199 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 AC103710.2-202ENST00000641454 2853 ntBASIC1.93□□□□□ -2.1
HOXA9P31269 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HOXA9P31269 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
HOXA9P31269 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HOXA9P31269 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA9P31269 RNU6-641P-201ENST00000384006 107 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HOXA9P31269 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 DEFB108C-201ENST00000400154 252 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA9P31269 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA9P31269 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA9P31269 MTCO2P34-201ENST00000421994 607 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXA9P31269 MTND1P27-201ENST00000451117 902 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AL121769.1-201ENST00000469473 401 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA9P31269 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA9P31269 RNU6-1183P-201ENST00000517054 60 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 RNU6-1315P-201ENST00000517187 99 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AP002963.1-201ENST00000530590 184 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA9P31269 MIR1273C-201ENST00000578669 77 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC245014.2-201ENST00000603689 287 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC246785.4-201ENST00000605374 287 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AL158032.1-201ENST00000605401 106 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC126118.1-201ENST00000607744 628 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC012409.4-201ENST00000612923 249 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HOXA9P31269 AC136475.10-201ENST00000620253 385 ntBASIC1.92□□□□□ -2.1
HOXA9P31269 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA9P31269 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HOXA9P31269 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HOXA9P31269 Y_RNA.51-201ENST00000362725 102 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 RNU6-181P-201ENST00000363225 107 ntBASIC1.91□□□□□ -2.1
HOXA9P31269 Y_RNA.367-201ENST00000365544 101 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms