Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-18P-201ENST00000384527 107 ntBASIC3.4□□□□□ -1.87
CD40P25942 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
CD40P25942 SNORA48.7-201ENST00000391302 135 ntBASIC3.4□□□□□ -1.87
CD40P25942 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD40P25942 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
CD40P25942 MIR1302-3-201ENST00000408128 138 ntBASIC3.4□□□□□ -1.87
CD40P25942 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC138623.1-201ENST00000418060 216 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
CD40P25942 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.4□□□□□ -1.87
CD40P25942 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC011742.1-201ENST00000431448 434 ntBASIC3.4□□□□□ -1.87
CD40P25942 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC069285.2-201ENST00000440210 275 ntBASIC3.4□□□□□ -1.87
CD40P25942 IPO7P1-201ENST00000442031 636 ntBASIC3.4□□□□□ -1.87
CD40P25942 U8.22-201ENST00000459141 133 ntBASIC3.4□□□□□ -1.87
CD40P25942 SNORA84-201ENST00000459229 133 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC010469.1-201ENST00000463864 576 ntBASIC3.4□□□□□ -1.87
CD40P25942 BTF3L4P4-201ENST00000506381 449 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.4□□□□□ -1.87
CD40P25942 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.4□□□□□ -1.87
CD40P25942 AC105137.2-201ENST00000569073 466 ntBASIC3.4□□□□□ -1.87
CD40P25942 MIR5571-201ENST00000577998 113 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.4□□□□□ -1.87
CD40P25942 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.4□□□□□ -1.87
CD40P25942 AL390123.1-201ENST00000603216 237 ntBASIC3.4□□□□□ -1.87
CD40P25942 AL355877.2-201ENST00000603670 358 ntBASIC3.4□□□□□ -1.87
CD40P25942 RMST_6.1-201ENST00000611980 203 ntBASIC3.4□□□□□ -1.87
CD40P25942 AC243829.7-201ENST00000633081 225 ntBASIC3.4□□□□□ -1.87
CD40P25942 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD40P25942 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD40P25942 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.4□□□□□ -1.87
CD40P25942 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD40P25942 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD40P25942 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD40P25942 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40P25942 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD40P25942 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD40P25942 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
CD40P25942 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CD40P25942 AC092268.1-201ENST00000342691 405 ntBASIC3.39□□□□□ -1.87
CD40P25942 RNU6-1285P-201ENST00000363480 105 ntBASIC3.39□□□□□ -1.87
CD40P25942 SNORD115-32-201ENST00000364079 82 ntBASIC3.39□□□□□ -1.87
CD40P25942 RNU4-50P-201ENST00000364361 141 ntBASIC3.39□□□□□ -1.87
CD40P25942 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
CD40P25942 Y_RNA.512-201ENST00000384518 102 ntBASIC3.39□□□□□ -1.87
CD40P25942 MIR153-2-201ENST00000385225 87 ntBASIC3.39□□□□□ -1.87
CD40P25942 RNU6-1109P-201ENST00000391187 107 ntBASIC3.39□□□□□ -1.87
CD40P25942 RPL21P75-201ENST00000396599 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
CD40P25942 RPL21P28-201ENST00000401418 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 SNORA3.3-201ENST00000408712 125 ntBASIC3.39□□□□□ -1.87
CD40P25942 RNA5SP104-201ENST00000410989 118 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL590556.1-201ENST00000423231 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 RPL23AP22-201ENST00000437556 453 ntBASIC3.39□□□□□ -1.87
CD40P25942 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40P25942 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40P25942 RPL21P39-201ENST00000463605 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC087190.1-201ENST00000484462 480 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC107032.1-201ENST00000485945 480 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC132942.1-201ENST00000486753 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC093591.1-201ENST00000491435 481 ntBASIC3.39□□□□□ -1.87
CD40P25942 RPL21P16-201ENST00000495531 483 ntBASIC3.39□□□□□ -1.87
CD40P25942 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40P25942 MIR3149-201ENST00000584629 83 ntBASIC3.39□□□□□ -1.87
CD40P25942 RPS15AP11-201ENST00000594193 385 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL391813.1-201ENST00000603098 260 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC007792.1-201ENST00000623023 402 ntBASIC3.39□□□□□ -1.87
CD40P25942 AC091903.1-201ENST00000624322 454 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL773545.4-201ENST00000637262 310 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL450472.1-202ENST00000637286 180 ntBASIC3.39□□□□□ -1.87
CD40P25942 AL513478.4-201ENST00000641636 310 ntBASIC3.39□□□□□ -1.87
CD40P25942 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD40P25942 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.39□□□□□ -1.87
CD40P25942 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD40P25942 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 AC002543.1-201ENST00000299783 1954 ntBASIC3.38□□□□□ -1.87
CD40P25942 RNU6-212P-201ENST00000362642 104 ntBASIC3.38□□□□□ -1.87
CD40P25942 RNU1-105P-201ENST00000363470 161 ntBASIC3.38□□□□□ -1.87
CD40P25942 SNORA63.7-201ENST00000365579 123 ntBASIC3.38□□□□□ -1.87
CD40P25942 Y_RNA.551-201ENST00000384661 102 ntBASIC3.38□□□□□ -1.87
CD40P25942 MIR93-201ENST00000385024 80 ntBASIC3.38□□□□□ -1.87
CD40P25942 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 UBA52P6-201ENST00000399822 382 ntBASIC3.38□□□□□ -1.87
CD40P25942 RN7SKP156-201ENST00000410308 342 ntBASIC3.38□□□□□ -1.87
CD40P25942 SNORA57.3-201ENST00000411095 141 ntBASIC3.38□□□□□ -1.87
CD40P25942 AL591419.1-201ENST00000427423 339 ntBASIC3.38□□□□□ -1.87
CD40P25942 AC083863.1-201ENST00000438811 231 ntBASIC3.38□□□□□ -1.87
CD40P25942 HMGB1P37-201ENST00000439613 609 ntBASIC3.38□□□□□ -1.87
CD40P25942 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.38□□□□□ -1.87
CD40P25942 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40P25942 snoU13.6-201ENST00000458785 104 ntBASIC3.38□□□□□ -1.87
CD40P25942 AP001324.2-201ENST00000461163 319 ntBASIC3.38□□□□□ -1.87
CD40P25942 RPL21P129-201ENST00000491732 478 ntBASIC3.38□□□□□ -1.87
CD40P25942 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
CD40P25942 RNU6-397P-201ENST00000516226 104 ntBASIC3.38□□□□□ -1.87
CD40P25942 AC021231.3-201ENST00000558497 370 ntBASIC3.38□□□□□ -1.87
CD40P25942 AC090617.3-201ENST00000573670 475 ntBASIC3.38□□□□□ -1.87
CD40P25942 AC025946.2-201ENST00000603398 234 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms