Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORD116.3-201ENST00000517176 78 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 RNU6-1315P-201ENST00000517187 99 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 TRAV37-201ENST00000553906 342 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 7SK.7-201ENST00000603504 247 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 AL121917.1-203ENST00000605534 577 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 MIR3976-201ENST00000606807 139 ntBASIC3.57□□□□□ -1.84
HLA-DOAP06340 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-DOAP06340 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC005592.1-201ENST00000566527 1640 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC073325.2-201ENST00000339545 159 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 Y_RNA.428-201ENST00000384078 102 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 Y_RNA.510-201ENST00000384511 114 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 RNU6-325P-201ENST00000411132 105 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AL030996.1-201ENST00000411430 235 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AL592148.1-201ENST00000413568 445 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 DPH3P2-201ENST00000422618 250 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 NDUFB4P7-201ENST00000423198 363 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AL133396.1-201ENST00000432048 687 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 RPS12P18-201ENST00000442381 270 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 PCMTD1P1-201ENST00000455560 355 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC008571.1-201ENST00000467232 300 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC068781.1-201ENST00000488231 618 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 RNU6-635P-201ENST00000516651 102 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC107016.2-201ENST00000547968 190 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 AL033523.1-201ENST00000605153 153 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 RMST_8.1-201ENST00000610287 165 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 Z69720.2-201ENST00000624755 279 ntBASIC3.56□□□□□ -1.84
HLA-DOAP06340 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DOAP06340 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DOAP06340 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNU6-99P-201ENST00000364721 107 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 Y_RNA.389-201ENST00000383924 113 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 MIR607-201ENST00000385241 96 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 MIR493-201ENST00000385254 89 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 MIR325-201ENST00000385260 98 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNU6-1025P-201ENST00000410629 104 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNU6-293P-201ENST00000411259 106 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 PGBD4P6-201ENST00000421501 610 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AL139132.1-201ENST00000431587 344 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RPL21P2-201ENST00000440049 481 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RPS29P26-201ENST00000477483 171 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC139453.3-201ENST00000493276 369 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC005921.1-201ENST00000510589 286 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC008716.1-201ENST00000511084 513 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 SCGB1D5P-201ENST00000515134 247 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNU1-143P-201ENST00000516296 146 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNA5SP290-201ENST00000517133 127 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 CBX3P8-201ENST00000532412 525 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 TRAV32-201ENST00000553993 340 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AL157871.3-201ENST00000557231 293 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 MIR1273C-201ENST00000578669 77 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AC107294.1-201ENST00000609524 467 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 U1.23-201ENST00000610293 146 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 RNU1-68P-201ENST00000615382 146 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 AL713922.2-201ENST00000619384 716 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 U1.39-201ENST00000621562 146 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 MIR6852-201ENST00000621699 66 ntBASIC3.55□□□□□ -1.84
HLA-DOAP06340 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DOAP06340 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DOAP06340 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-37P-201ENST00000362692 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 Y_RNA.149-201ENST00000363558 117 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 SNORA5B-201ENST00000363786 132 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-11P-201ENST00000364234 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 Y_RNA.245-201ENST00000364493 95 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-25P-201ENST00000383873 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-1-201ENST00000383898 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-48P-201ENST00000384161 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-36P-201ENST00000384172 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-4P-201ENST00000384205 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-5P-201ENST00000384238 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-3P-201ENST00000384314 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-16P-201ENST00000384385 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms