Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORD56.1-201ENST00000362913 68 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU1-23P-201ENST00000363361 144 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-715P-201ENST00000365204 103 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-1029P-201ENST00000384109 107 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-45P-201ENST00000384471 107 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 Y_RNA.510-201ENST00000384511 114 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-607P-201ENST00000411283 108 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AL358934.1-201ENST00000432346 324 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC009238.1-201ENST00000442165 424 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC009237.6-201ENST00000446969 424 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AL118520.1-201ENST00000450770 291 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 CYP2C59P-201ENST00000457790 269 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU7-182P-201ENST00000459009 62 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC006512.1-201ENST00000468816 291 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC117503.1-201ENST00000472241 394 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC018868.1-201ENST00000491307 315 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNU6-1178P-201ENST00000516674 107 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC026407.1-201ENST00000518369 204 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC233702.2-202ENST00000562547 291 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 MIR4528-201ENST00000577763 90 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC008088.1-201ENST00000580993 280 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 MIR4435-1-201ENST00000582552 80 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AL590229.1-201ENST00000603497 542 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AP001486.3-201ENST00000615334 372 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 AC136475.10-201ENST00000620253 385 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 MIR6852-201ENST00000621699 66 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 SCARNA4-202ENST00000625402 129 ntBASIC1.54□□□□□ -2.16
HLA-DQA1P01909 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.54□□□□□ -2.16
HLA-DQA1P01909 OR4G2P-201ENST00000328113 903 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RNU6-1303P-201ENST00000364841 107 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RNA5SP240-201ENST00000365355 128 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RNU6-487P-201ENST00000365430 104 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RNU6-348P-201ENST00000384386 107 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 MIR221-201ENST00000385135 110 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AF228730.1-201ENST00000397972 663 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AL669831.1-202ENST00000428504 417 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC133104.1-201ENST00000429100 218 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 GTF2IP13-201ENST00000438487 386 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC016691.1-201ENST00000441321 413 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 PSPHP1-201ENST00000450062 261 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 MTND1P27-201ENST00000451117 902 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RPL30P12-201ENST00000474666 353 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC092436.1-201ENST00000506450 503 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC074344.1-201ENST00000512823 224 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC104136.1-201ENST00000512969 394 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 SNORA4.4-201ENST00000515921 135 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RNA5SP281-201ENST00000516504 135 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC109329.1-201ENST00000518744 317 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC093249.1-201ENST00000567049 203 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC090897.2-201ENST00000581715 130 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC119751.7-201ENST00000600494 245 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC006566.1-201ENST00000608943 513 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 RMST_4.1-201ENST00000616886 107 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC099842.1-201ENST00000619919 596 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 SEPT14P19-203ENST00000633205 211 ntBASIC1.53□□□□□ -2.16
HLA-DQA1P01909 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DQA1P01909 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
HLA-DQA1P01909 HAUS6P2-201ENST00000433254 2404 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 RNA5SP289-201ENST00000362332 137 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 SNORA25B-201ENST00000365507 128 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 RNU4-48P-201ENST00000365559 182 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 RNU2-9P-201ENST00000410194 145 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 EDDM3CP-201ENST00000415977 425 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 MTCO2P34-201ENST00000421994 607 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 MTCO2P11-201ENST00000431069 680 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AL596276.1-201ENST00000434465 418 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 MTND4P32-201ENST00000437189 1237 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms