Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU6-107P-201ENST00000516643 102 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AP004371.1-201ENST00000525240 214 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 MIR3121-201ENST00000579680 77 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AC211433.2-201ENST00000608433 387 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.12□□□□□ -1.59
ACTN4O43707 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ACTN4O43707 AL136164.4-201ENST00000625013 2135 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AC125257.1-201ENST00000560400 2930 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 AC005332.5-201ENST00000591222 2919 ntBASIC5.12□□□□□ -1.59
ACTN4O43707 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
ACTN4O43707 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ACTN4O43707 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTN4O43707 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTN4O43707 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTN4O43707 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
ACTN4O43707 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 AL133383.2-201ENST00000622958 2336 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ACTN4O43707 RNU1-62P-201ENST00000362599 164 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 U8.7-201ENST00000364940 136 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 SNORA40.5-201ENST00000391061 128 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 MIR320B2-201ENST00000408479 138 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 RNU6-710P-201ENST00000410424 105 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.11□□□□□ -1.59
ACTN4O43707 MTCO1P44-201ENST00000441935 243 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 RPL39P29-201ENST00000447779 157 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTN4O43707 RNU6-561P-201ENST00000516222 102 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 RNU1-103P-201ENST00000516502 125 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTN4O43707 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTN4O43707 MIR5688-201ENST00000580619 83 ntBASIC5.11□□□□□ -1.59
ACTN4O43707 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ACTN4O43707 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTN4O43707 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTN4O43707 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTN4O43707 MAPK10-303ENST00000641324 3959 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 RNU6-799P-201ENST00000363567 107 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 RNU6-1205P-201ENST00000363625 106 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 RNU6-454P-201ENST00000364292 107 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ACTN4O43707 RNU6-1264P-201ENST00000383891 107 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 RNU1-63P-201ENST00000383902 164 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 SNORA18.3-201ENST00000384122 132 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 RNU6-140P-201ENST00000384566 108 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 MIR659-201ENST00000384963 97 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTN4O43707 AIMP1P2-201ENST00000425294 312 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AL049745.1-201ENST00000433953 286 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTN4O43707 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 AC009237.8-201ENST00000445492 379 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 RN7SL329P-201ENST00000467740 299 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AC108022.1-201ENST00000493466 478 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 AC118273.1-201ENST00000525324 3006 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTN4O43707 AC044860.2-201ENST00000561005 179 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 MIR4458-201ENST00000578872 75 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AL356575.1-201ENST00000603008 283 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTN4O43707 AC091905.2-201ENST00000623143 306 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 OR14L1P-202ENST00000641545 3009 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTN4O43707 CPHL1P-201ENST00000461341 3407 ntBASIC5.1□□□□□ -1.59
ACTN4O43707 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ACTN4O43707 AC008555.8-201ENST00000623602 2168 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 SDAD1P1-202ENST00000524156 2051 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 ZNF137P-201ENST00000456718 1920 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTN4O43707 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTN4O43707 Y_RNA.229-201ENST00000364347 113 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 RNU1-100P-201ENST00000365255 165 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 Y_RNA.495-201ENST00000384435 112 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 RPL21P17-201ENST00000397467 475 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AL645733.1-201ENST00000402250 217 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 Z98745.1-201ENST00000402553 494 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AL031003.1-201ENST00000404229 172 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AC125238.1-201ENST00000448842 249 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AC093270.2-201ENST00000486157 792 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 SNORD33.1-201ENST00000516213 88 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AC090142.3-201ENST00000519012 385 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.09□□□□□ -1.59
ACTN4O43707 AC091042.1-201ENST00000579213 173 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 AL670379.3-201ENST00000605040 251 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ACTN4O43707 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTN4O43707 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms