Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 LINC01355-201ENST00000566551 5444 ntBASIC4.32□□□□□ -1.72
SOX1O00570 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SOX1O00570 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
SOX1O00570 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 UBE2WP1-201ENST00000362030 340 ntBASIC4.31□□□□□ -1.72
SOX1O00570 RNU6-137P-201ENST00000363680 108 ntBASIC4.31□□□□□ -1.72
SOX1O00570 Y_RNA.233-201ENST00000364407 101 ntBASIC4.31□□□□□ -1.72
SOX1O00570 Y_RNA.240-201ENST00000364469 95 ntBASIC4.31□□□□□ -1.72
SOX1O00570 SNORA29-201ENST00000384183 140 ntBASIC4.31□□□□□ -1.72
SOX1O00570 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SOX1O00570 RNU6-651P-201ENST00000411040 105 ntBASIC4.31□□□□□ -1.72
SOX1O00570 RPL36AP10-201ENST00000421785 322 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC092047.1-201ENST00000424997 240 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AL591419.1-201ENST00000427423 339 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX1O00570 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX1O00570 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX1O00570 SSXP4-201ENST00000451349 245 ntBASIC4.31□□□□□ -1.72
SOX1O00570 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX1O00570 AC117440.1-201ENST00000474107 571 ntBASIC4.31□□□□□ -1.72
SOX1O00570 RPL26P26-201ENST00000480251 434 ntBASIC4.31□□□□□ -1.72
SOX1O00570 RNU7-200P-201ENST00000516105 62 ntBASIC4.31□□□□□ -1.72
SOX1O00570 SNORA27.4-201ENST00000516650 95 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.31□□□□□ -1.72
SOX1O00570 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC016256.1-201ENST00000547971 354 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX1O00570 H3F3AP1-201ENST00000559984 334 ntBASIC4.31□□□□□ -1.72
SOX1O00570 MIR5684-201ENST00000585074 65 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC012493.2-201ENST00000595083 291 ntBASIC4.31□□□□□ -1.72
SOX1O00570 YPEL5P2-201ENST00000605553 359 ntBASIC4.31□□□□□ -1.72
SOX1O00570 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SOX1O00570 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.31□□□□□ -1.72
SOX1O00570 AC006386.2-201ENST00000624491 75 ntBASIC4.31□□□□□ -1.72
SOX1O00570 AC012005.1-201ENST00000624575 75 ntBASIC4.31□□□□□ -1.72
SOX1O00570 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SOX1O00570 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX1O00570 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX1O00570 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SOX1O00570 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SOX1O00570 RNA5SP361-201ENST00000362686 118 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RNA5SP51-201ENST00000364750 119 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RNU6-918P-201ENST00000391219 106 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RN7SKP51-201ENST00000410781 304 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RNU6-1198P-201ENST00000516904 67 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RNU6-1183P-201ENST00000517054 60 ntBASIC4.3□□□□□ -1.72
SOX1O00570 RNA5SP179-201ENST00000517284 121 ntBASIC4.3□□□□□ -1.72
SOX1O00570 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX1O00570 ZNF192P1-203ENST00000565888 810 ntBASIC4.3□□□□□ -1.72
SOX1O00570 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX1O00570 AC008749.1-201ENST00000597650 306 ntBASIC4.3□□□□□ -1.72
SOX1O00570 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX1O00570 AP001485.1-201ENST00000604799 199 ntBASIC4.3□□□□□ -1.72
SOX1O00570 MIR8069-1-201ENST00000616627 86 ntBASIC4.3□□□□□ -1.72
SOX1O00570 AC024581.2-201ENST00000619986 252 ntBASIC4.3□□□□□ -1.72
SOX1O00570 MIR8069-2-201ENST00000621412 86 ntBASIC4.3□□□□□ -1.72
SOX1O00570 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX1O00570 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX1O00570 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.29□□□□□ -1.72
SOX1O00570 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 MIR410-201ENST00000362222 80 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-942P-201ENST00000363002 107 ntBASIC4.29□□□□□ -1.72
SOX1O00570 Y_RNA.230-201ENST00000364348 109 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-281P-201ENST00000384212 103 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-1035P-201ENST00000384477 107 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-1081P-201ENST00000384537 107 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-140P-201ENST00000384566 108 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AL451074.5-201ENST00000415894 435 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX1O00570 AC005326.1-201ENST00000429197 123 ntBASIC4.29□□□□□ -1.72
SOX1O00570 WARS2P1-201ENST00000429678 537 ntBASIC4.29□□□□□ -1.72
SOX1O00570 MTATP6P7-201ENST00000453315 681 ntBASIC4.29□□□□□ -1.72
SOX1O00570 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RN7SKP46-201ENST00000515942 234 ntBASIC4.29□□□□□ -1.72
SOX1O00570 RNU6-346P-201ENST00000516288 111 ntBASIC4.29□□□□□ -1.72
SOX1O00570 MRPS18CP4-201ENST00000535821 231 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AC027288.2-201ENST00000553028 243 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms