Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DFFAO00273 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DFFAO00273 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
DFFAO00273 SNORD116-20-201ENST00000384529 92 ntBASIC1.49□□□□□ -2.17
DFFAO00273 CBX3P9-201ENST00000402326 552 ntBASIC1.49□□□□□ -2.17
DFFAO00273 EIF4EP2-201ENST00000422816 654 ntBASIC1.49□□□□□ -2.17
DFFAO00273 USP9YP18-201ENST00000425912 695 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC118469.1-201ENST00000442943 488 ntBASIC1.49□□□□□ -2.17
DFFAO00273 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
DFFAO00273 snoU13.14-201ENST00000459372 104 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC096745.1-201ENST00000509945 370 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC117532.1-201ENST00000514638 323 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.49□□□□□ -2.17
DFFAO00273 AC022616.8-201ENST00000533569 253 ntBASIC1.49□□□□□ -2.17
DFFAO00273 GNAI2P1-201ENST00000541815 315 ntBASIC1.49□□□□□ -2.17
DFFAO00273 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.49□□□□□ -2.17
DFFAO00273 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
DFFAO00273 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
DFFAO00273 AL031281.1-201ENST00000604049 488 ntBASIC1.49□□□□□ -2.17
DFFAO00273 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
DFFAO00273 AC004908.3-201ENST00000610248 625 ntBASIC1.49□□□□□ -2.17
DFFAO00273 SCARNA4-202ENST00000625402 129 ntBASIC1.49□□□□□ -2.17
DFFAO00273 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
DFFAO00273 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
DFFAO00273 RNU6-944P-201ENST00000364023 107 ntBASIC1.48□□□□□ -2.17
DFFAO00273 RNU6-660P-201ENST00000364566 109 ntBASIC1.48□□□□□ -2.17
DFFAO00273 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
DFFAO00273 VN1R36P-201ENST00000414936 291 ntBASIC1.48□□□□□ -2.17
DFFAO00273 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.48□□□□□ -2.17
DFFAO00273 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
DFFAO00273 AL360221.1-201ENST00000445989 335 ntBASIC1.48□□□□□ -2.17
DFFAO00273 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.48□□□□□ -2.17
DFFAO00273 PTP4A1P4-201ENST00000512479 322 ntBASIC1.48□□□□□ -2.17
DFFAO00273 RNU5A-4P-201ENST00000516588 111 ntBASIC1.48□□□□□ -2.17
DFFAO00273 RN7SKP219-201ENST00000516825 296 ntBASIC1.48□□□□□ -2.17
DFFAO00273 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.48□□□□□ -2.17
DFFAO00273 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.48□□□□□ -2.17
DFFAO00273 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.48□□□□□ -2.17
DFFAO00273 MIR548AC-201ENST00000585049 88 ntBASIC1.48□□□□□ -2.17
DFFAO00273 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
DFFAO00273 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.48□□□□□ -2.17
DFFAO00273 AL391994.1-201ENST00000254724 282 ntBASIC1.47□□□□□ -2.17
DFFAO00273 OR4G2P-201ENST00000328113 903 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC073343.1-201ENST00000328239 651 ntBASIC1.47□□□□□ -2.17
DFFAO00273 U8.3-201ENST00000363321 132 ntBASIC1.47□□□□□ -2.17
DFFAO00273 RNU6-1200P-201ENST00000384162 107 ntBASIC1.47□□□□□ -2.17
DFFAO00273 U8.10-201ENST00000384260 133 ntBASIC1.47□□□□□ -2.17
DFFAO00273 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
DFFAO00273 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
DFFAO00273 RNU11-3P-201ENST00000391111 133 ntBASIC1.47□□□□□ -2.17
DFFAO00273 RNA5SP390-201ENST00000410191 113 ntBASIC1.47□□□□□ -2.17
DFFAO00273 SRIP3-201ENST00000413200 219 ntBASIC1.47□□□□□ -2.17
DFFAO00273 UBE2V1P4-201ENST00000425374 344 ntBASIC1.47□□□□□ -2.17
DFFAO00273 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.47□□□□□ -2.17
DFFAO00273 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.47□□□□□ -2.17
DFFAO00273 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.47□□□□□ -2.17
DFFAO00273 AL049829.1-201ENST00000465411 156 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.47□□□□□ -2.17
DFFAO00273 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
DFFAO00273 Y_RNA.687-201ENST00000516558 91 ntBASIC1.47□□□□□ -2.17
DFFAO00273 RNA5SP337-201ENST00000517007 109 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.47□□□□□ -2.17
DFFAO00273 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.47□□□□□ -2.17
DFFAO00273 AC018630.3-201ENST00000542637 96 ntBASIC1.47□□□□□ -2.17
DFFAO00273 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.47□□□□□ -2.17
DFFAO00273 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.47□□□□□ -2.17
DFFAO00273 AC012065.4-201ENST00000602445 679 ntBASIC1.47□□□□□ -2.17
DFFAO00273 DEFB131E-202ENST00000602581 683 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.47□□□□□ -2.17
DFFAO00273 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.47□□□□□ -2.17
DFFAO00273 U6.42-201ENST00000618440 107 ntBASIC1.47□□□□□ -2.17
DFFAO00273 AP002782.1-201ENST00000623107 614 ntBASIC1.47□□□□□ -2.17
DFFAO00273 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.47□□□□□ -2.17
DFFAO00273 AC092192.1-201ENST00000633154 1018 ntBASIC1.47□□□□□ -2.17
DFFAO00273 RNU6-212P-201ENST00000362642 104 ntBASIC1.46□□□□□ -2.18
DFFAO00273 SNORD56.2-201ENST00000363242 71 ntBASIC1.46□□□□□ -2.18
DFFAO00273 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
DFFAO00273 RNU6-1164P-201ENST00000364428 107 ntBASIC1.46□□□□□ -2.18
DFFAO00273 MIR29B2-201ENST00000385055 81 ntBASIC1.46□□□□□ -2.18
DFFAO00273 SNORD115.1-201ENST00000391109 76 ntBASIC1.46□□□□□ -2.18
DFFAO00273 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
DFFAO00273 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AL365400.1-201ENST00000431854 640 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AC004854.1-201ENST00000440356 349 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.46□□□□□ -2.18
DFFAO00273 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.46□□□□□ -2.18
DFFAO00273 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.46□□□□□ -2.18
DFFAO00273 AC027575.1-201ENST00000481064 460 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
DFFAO00273 AC112204.1-201ENST00000502591 103 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.46□□□□□ -2.18
DFFAO00273 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
DFFAO00273 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.46□□□□□ -2.18
DFFAO00273 AP005660.1-201ENST00000522972 293 ntBASIC1.46□□□□□ -2.18
DFFAO00273 MTND4LP18-201ENST00000526864 291 ntBASIC1.46□□□□□ -2.18
DFFAO00273 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.46□□□□□ -2.18
DFFAO00273 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms