Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AF127577.6-201ENST00000623352 2191 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 SCN1A-220ENST00000641603 12506 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 AL133243.3-201ENST00000617415 3004 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-1164P-201ENST00000364428 107 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-213P-201ENST00000384051 104 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-36P-201ENST00000384172 107 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-16P-201ENST00000384385 107 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-843P-201ENST00000384454 104 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-15P-201ENST00000384534 107 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 MIR670-201ENST00000390142 98 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-817P-201ENST00000391083 104 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU11-4P-201ENST00000391149 133 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 PTMAP2-201ENST00000397627 327 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-592P-201ENST00000411333 103 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 SNORD56-201ENST00000413522 71 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 CYCSP10-201ENST00000417973 294 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 USP9YP7-201ENST00000436723 430 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 HLA-N-201ENST00000437516 135 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 USP9YP32-201ENST00000452432 430 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-953P-201ENST00000459154 107 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 AL592156.1-201ENST00000508758 304 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-914P-201ENST00000516749 109 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SKP272-201ENST00000516988 232 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 AC053481.4-201ENST00000583164 216 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 AC010928.2-201ENST00000588017 287 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 MIR6867-201ENST00000610636 67 ntBASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDZRN3Q9UPQ7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP52-201ENST00000362448 134 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 Y_RNA.251-201ENST00000364551 99 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-915P-201ENST00000364943 103 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-813P-201ENST00000384691 107 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-19P-201ENST00000384718 107 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 SNORD78.1-201ENST00000390866 65 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNU2-21P-201ENST00000410368 188 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AP000870.1-201ENST00000472927 406 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SKP164-201ENST00000516138 266 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP143-201ENST00000516936 115 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC103996.1-201ENST00000555468 102 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SL600P-201ENST00000581811 299 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC008739.3-201ENST00000603262 127 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC069294.1-201ENST00000608397 350 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AL773545.4-201ENST00000637262 310 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AL513478.4-201ENST00000641636 310 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 AC106871.1-201ENST00000568324 3102 ntBASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
PDZRN3Q9UPQ7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-103P-201ENST00000363686 107 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-1179P-201ENST00000384667 107 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 SNORD66.1-201ENST00000391230 76 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 Y_RNA.630-201ENST00000411370 108 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AC063979.1-201ENST00000415539 377 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AL117339.3-201ENST00000418733 162 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RPL23AP52-201ENST00000439311 478 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 ABCF2P2-201ENST00000450549 296 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AL121594.1-201ENST00000475906 575 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AC146944.2-203ENST00000502493 354 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AC139495.1-202ENST00000513164 354 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-390P-201ENST00000516259 103 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP49-201ENST00000516450 115 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 MIR3145-201ENST00000580727 82 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 AP000787.2-201ENST00000604432 568 ntBASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms