Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TRIM35Q9UPQ4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNA5SP151-201ENST00000365632 117 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 SNORA26.3-201ENST00000391119 136 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 Y_RNA.587-201ENST00000391210 103 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 AL590004.2-201ENST00000404787 371 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 SNORA36B-201ENST00000410438 131 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNU2-55P-201ENST00000411146 174 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNU2-32P-201ENST00000411193 191 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RPL36AP10-201ENST00000421785 322 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 AC099336.2-201ENST00000422457 254 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 AC099560.2-201ENST00000457554 255 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNU6-1256P-201ENST00000516539 103 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNU1-104P-201ENST00000517280 175 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RN7SL52P-201ENST00000584271 284 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 MIR548AY-201ENST00000617669 107 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RN7SL722P-201ENST00000617780 284 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 U73479.1-201ENST00000618062 168 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RN7SL565P-201ENST00000618246 284 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 AL035470.1-201ENST00000622571 220 ntBASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM35Q9UPQ4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AL450326.2-201ENST00000421913 1962 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AL589743.1-201ENST00000551932 2712 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 SNORA63.5-201ENST00000363548 123 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 RNU6-484P-201ENST00000384016 107 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 MIR129-1-201ENST00000384972 72 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 RNA5SP136-201ENST00000410906 107 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AL356867.1-201ENST00000429623 299 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AC107297.1-201ENST00000459991 176 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 RPL23AP14-201ENST00000468281 468 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 AC006517.1-201ENST00000480485 328 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 FAM71BP1-201ENST00000604431 523 ntBASIC6□□□□□ -1.45
TRIM35Q9UPQ4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6□□□□□ -1.45
TRIM35Q9UPQ4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 AC112198.2-201ENST00000426589 6996 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 Y_RNA.361-201ENST00000365515 120 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 U1.1-201ENST00000384101 164 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 CYP4F29P-201ENST00000420685 446 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 Z74021.1-201ENST00000423610 407 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 CALM2P4-201ENST00000430810 426 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 AC117454.1-201ENST00000491120 168 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 RNA5SP446-201ENST00000515955 82 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 RNA5SP154-201ENST00000516193 111 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 HMGN2P47-201ENST00000559378 272 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 LINC00933-203ENST00000559812 219 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 SNRPGP20-201ENST00000604477 205 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 AC025754.2-201ENST00000606491 432 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 AL672167.1-203ENST00000641299 2975 ntBASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM35Q9UPQ4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AC126755.2-208ENST00000327792 462 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AC138969.1-213ENST00000331436 462 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 DEFB108F-201ENST00000344638 222 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms