Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TRAV28-201ENST00000557548 323 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 AC008962.1-201ENST00000605729 304 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 RNU6-6P-201ENST00000606623 107 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 RMST_4.1-201ENST00000616886 107 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 AC008121.3-201ENST00000618726 433 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 AC091925.1-201ENST00000623204 462 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.84□□□□□ -1.79
SYNPO2Q9UMS6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYNPO2Q9UMS6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SYNPO2Q9UMS6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYNPO2Q9UMS6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC007785.2-201ENST00000598627 1916 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.48-201ENST00000362710 103 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 MIR325-201ENST00000385260 98 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 RNA5SP229-201ENST00000410809 99 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC115115.1-201ENST00000449927 248 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC022493.2-201ENST00000506122 481 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC113155.1-201ENST00000511141 769 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 RN7SKP282-201ENST00000516824 299 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AP000942.4-201ENST00000604811 241 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AL160281.1-201ENST00000605307 311 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AL121917.1-203ENST00000605534 577 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC006157.1-201ENST00000611750 366 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 AC083806.3-201ENST00000614016 455 ntBASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPO2Q9UMS6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-574P-201ENST00000384265 107 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 RNY1P14-201ENST00000384426 108 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 MIR493-201ENST00000385254 89 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL030996.1-201ENST00000411430 235 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 CYCSP32-201ENST00000440548 321 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 PCMTD1P1-201ENST00000455560 355 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 RN7SL504P-201ENST00000494496 287 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 RNA5SP165-201ENST00000517142 115 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 MIR4680-201ENST00000580906 66 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 MIR4325-201ENST00000583049 90 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AC005014.2-201ENST00000607795 599 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 uc_338.1-201ENST00000612113 180 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL110115.1-201ENST00000614396 364 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AC002076.2-201ENST00000617362 122 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 AL359693.1-201ENST00000614959 2407 ntBASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPO2Q9UMS6 MTND5P16-201ENST00000460269 1703 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU1-70P-201ENST00000362618 164 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-1106P-201ENST00000390845 107 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-293P-201ENST00000411259 106 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 USMG5P1-201ENST00000425964 177 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AC093151.1-201ENST00000427711 313 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 Z82210.1-201ENST00000440037 231 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 GSTA11P-201ENST00000452866 669 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 RPL12P25-201ENST00000455592 494 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AC004805.2-201ENST00000605382 482 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 MIR7153-201ENST00000637758 57 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AC006504.1-201ENST00000562493 3666 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 CDC27P3-201ENST00000635418 1910 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 AL355596.1-201ENST00000565399 3996 ntBASIC3.81□□□□□ -1.8
SYNPO2Q9UMS6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms