Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 MTND3P23-201ENST00000431980 347 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC073614.1-201ENST00000438690 650 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC079448.1-201ENST00000449377 373 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AL590365.1-201ENST00000450788 243 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC079804.2-201ENST00000490376 200 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 RNU2-10P-201ENST00000516375 211 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC104383.1-201ENST00000530297 370 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 CBX3P7-201ENST00000532876 502 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLIP2Q9UDT6 MIR3124-201ENST00000582636 67 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 HMGN1P30-201ENST00000589286 268 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC104763.2-201ENST00000604179 382 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC112191.3-201ENST00000604371 277 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC090578.1-201ENST00000604955 591 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AP000860.1-201ENST00000605250 559 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AL365204.3-201ENST00000612448 685 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 Y_RNA.804-201ENST00000615262 101 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC006338.1-201ENST00000618453 749 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC136475.10-201ENST00000620253 385 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 DUXAP9-208ENST00000622815 614 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC091953.2-201ENST00000623979 160 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 MTND4P29-201ENST00000503122 1372 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 RNU6-797P-201ENST00000363101 109 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RNY4P16-201ENST00000364768 94 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RNU5A-6P-201ENST00000384136 116 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RNU6-533P-201ENST00000384144 107 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AL355497.1-201ENST00000406262 551 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AL590002.1-201ENST00000406554 418 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RNU2-36P-201ENST00000410361 191 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RPS3AP3-201ENST00000411933 242 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RPS12P24-201ENST00000412619 387 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC138393.2-201ENST00000414742 246 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 MICF-203ENST00000432679 129 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 BRK1P2-201ENST00000442875 223 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AL033528.1-201ENST00000453780 140 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 RPS3AP17-201ENST00000472594 777 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC008628.2-201ENST00000502605 298 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC019235.1-201ENST00000503847 207 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC108078.1-201ENST00000508073 725 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC117522.1-201ENST00000509821 380 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AP003181.2-201ENST00000528941 181 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC118273.2-201ENST00000532092 465 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC006199.1-201ENST00000548728 219 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC024619.4-201ENST00000580924 316 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC005730.3-201ENST00000583067 366 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC174048.1-201ENST00000603389 144 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 AC093788.1-201ENST00000609356 927 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLIP2Q9UDT6 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 MIR7157-201ENST00000635801 60 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 MTND5P42-201ENST00000637720 498 ntBASIC2.53□□□□□ -2
CLIP2Q9UDT6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AL354685.2-201ENST00000448218 1447 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AL596028.1-201ENST00000326971 197 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 U8.3-201ENST00000363321 132 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 RNU6-960P-201ENST00000364056 120 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 SMIM11P1-201ENST00000369586 178 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 MIR181A1-201ENST00000385026 110 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 C1DP2-201ENST00000418167 426 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC007560.1-201ENST00000426912 237 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC000111.3-201ENST00000433478 193 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 MTND6P13-201ENST00000443510 523 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 UBE2V1P7-201ENST00000446395 340 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 MTND1P3-201ENST00000484956 952 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC139453.3-201ENST00000493276 369 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC091951.2-201ENST00000500762 203 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC023141.11-201ENST00000508864 202 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC009646.1-201ENST00000510455 318 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 RNU6-1092P-201ENST00000516955 87 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms