Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-1278P-201ENST00000516130 107 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 RNU6-677P-201ENST00000516914 101 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 AL121603.1-201ENST00000553815 142 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 OR1M4P-201ENST00000589199 287 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 MIR15A-201ENST00000607334 83 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 MIR7851-201ENST00000610611 160 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 MIR7112-201ENST00000616126 65 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ATG3Q9NT62 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG3Q9NT62 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG3Q9NT62 LINC02471-203ENST00000641941 4752 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG3Q9NT62 SNORD81.1-201ENST00000363064 77 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 RNU6-740P-201ENST00000364734 105 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 U8.8-201ENST00000365399 135 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 RNU1-89P-201ENST00000384592 164 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 MIR613-201ENST00000385248 95 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 RPL31P60-201ENST00000478450 367 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 TRBV12-2-201ENST00000489763 344 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 RPL7P23-201ENST00000493874 747 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 RNU6-390P-201ENST00000516259 103 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 AC069113.1-201ENST00000517763 267 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 AC022559.1-201ENST00000520905 205 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 SNORD39.4-201ENST00000620099 78 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 AP001148.1-201ENST00000624124 2359 ntBASIC4.64□□□□□ -1.67
ATG3Q9NT62 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ATG3Q9NT62 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.64□□□□□ -1.67
ATG3Q9NT62 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 RNU6-1081P-201ENST00000384537 107 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AL513475.1-201ENST00000406602 315 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 RN7SKP51-201ENST00000410781 304 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 MTND3P9-201ENST00000429526 346 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 NDUFB1P1-201ENST00000435191 180 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 AC087190.1-201ENST00000484462 480 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AC107032.1-201ENST00000485945 480 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 RPS23P5-201ENST00000495419 428 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AC005921.1-201ENST00000510589 286 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 SERF1AP1-201ENST00000514575 187 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 AC012493.2-201ENST00000595083 291 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AL121917.1-203ENST00000605534 577 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 MIR376A1-201ENST00000616574 68 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 U4.6-201ENST00000621618 127 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 DDX10P1-201ENST00000448545 1933 ntBASIC4.63□□□□□ -1.67
ATG3Q9NT62 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG3Q9NT62 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
ATG3Q9NT62 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 Y_RNA.81-201ENST00000362997 102 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 Y_RNA.122-201ENST00000363331 96 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 RNU6-595P-201ENST00000363944 107 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 RNA5SP235-201ENST00000365411 114 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AL591034.2-201ENST00000402839 359 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 MIR1183-201ENST00000408856 89 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 RNA5SP494-201ENST00000410653 129 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC007098.1-201ENST00000420122 367 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC099677.1-201ENST00000420575 175 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC092573.2-201ENST00000434546 243 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG3Q9NT62 HMGB1P22-201ENST00000505315 124 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 MTND5P41-201ENST00000517498 206 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
ATG3Q9NT62 AL034351.1-201ENST00000605288 668 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 AC123912.5-201ENST00000605470 343 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG3Q9NT62 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 ZNF299P-201ENST00000406845 1804 ntBASIC4.62□□□□□ -1.67
ATG3Q9NT62 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATG3Q9NT62 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG3Q9NT62 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 HAUS6P2-201ENST00000433254 2404 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
ATG3Q9NT62 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG3Q9NT62 Y_RNA.27-201ENST00000362540 103 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 SNORA7.2-201ENST00000364446 145 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 RNU6-47P-201ENST00000383866 107 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 RNY1P5-201ENST00000383890 115 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 RPS29P13-201ENST00000402041 169 ntBASIC4.61□□□□□ -1.67
ATG3Q9NT62 AL138878.1-201ENST00000405131 347 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms