Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VPS11Q9H270 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS11Q9H270 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
VPS11Q9H270 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS11Q9H270 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS11Q9H270 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS11Q9H270 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS11Q9H270 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS11Q9H270 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS11Q9H270 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS11Q9H270 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS11Q9H270 AL391987.6-201ENST00000305671 199 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 RNU6-288P-201ENST00000363690 104 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 RNU6-682P-201ENST00000363843 106 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 Y_RNA.352-201ENST00000365439 102 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS11Q9H270 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS11Q9H270 Y_RNA.526-201ENST00000384572 110 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS11Q9H270 MIR1298-201ENST00000408783 112 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC006989.1-201ENST00000427212 131 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 Y_RNA.644-201ENST00000459006 113 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC018437.1-201ENST00000492214 406 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC074198.2-201ENST00000508153 258 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 Y_RNA.674-201ENST00000516362 113 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 RNU7-4P-201ENST00000516961 62 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 DEFB108E-201ENST00000524692 240 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC011602.1-201ENST00000546484 331 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS11Q9H270 MIR3186-201ENST00000577404 85 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC012119.1-201ENST00000603184 222 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 AC136601.2-201ENST00000604356 474 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 HSPE1P7-201ENST00000604681 321 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.76□□□□□ -1.81
VPS11Q9H270 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS11Q9H270 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS11Q9H270 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VPS11Q9H270 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS11Q9H270 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS11Q9H270 Y_RNA.54-201ENST00000362766 105 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 Y_RNA.170-201ENST00000363746 110 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 RNU6-217P-201ENST00000384164 104 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 RNU6-1035P-201ENST00000384477 107 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS11Q9H270 AL356095.1-201ENST00000417217 199 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS11Q9H270 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS11Q9H270 RNU7-120P-201ENST00000459334 63 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 RNU7-138P-201ENST00000459479 64 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS11Q9H270 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS11Q9H270 Y_RNA.687-201ENST00000516558 91 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AP002770.2-201ENST00000543613 532 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 HIGD1AP1-201ENST00000550979 275 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AC120057.2-201ENST00000571520 271 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AL158827.2-201ENST00000602494 330 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AC092628.2-201ENST00000622492 339 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 AL691447.3-201ENST00000635020 330 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS11Q9H270 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS11Q9H270 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VPS11Q9H270 AP000560.1-201ENST00000624150 1937 ntBASIC3.75□□□□□ -1.81
VPS11Q9H270 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS11Q9H270 AL359693.1-201ENST00000614959 2407 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS11Q9H270 Y_RNA.16-201ENST00000362421 102 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RNU6-512P-201ENST00000364438 103 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RNU6-378P-201ENST00000384324 107 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 MIR591-201ENST00000385290 95 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RPS26P8-201ENST00000393490 348 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RNA5SP38-201ENST00000410750 119 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 Y_RNA.793-201ENST00000411222 111 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AC006946.1-201ENST00000429106 328 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RN7SL385P-201ENST00000468873 276 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 RPL7P49-201ENST00000471402 708 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS11Q9H270 Y_RNA.689-201ENST00000516589 107 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS11Q9H270 MIR4697-201ENST00000582977 78 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AL355877.2-201ENST00000603670 358 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 AC083809.1-201ENST00000615051 472 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 MIR6500-201ENST00000622700 86 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 AC112484.5-201ENST00000624189 228 ntBASIC3.74□□□□□ -1.81
VPS11Q9H270 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AC021753.1-201ENST00000635724 168 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms