Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-527P-201ENST00000363425 104 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-105P-201ENST00000363909 104 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 Y_RNA.476-201ENST00000384347 108 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 RNVU1-14-201ENST00000384770 164 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 MIR490-201ENST00000384865 128 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AP000275.1-201ENST00000411943 390 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 RPL23AP83-201ENST00000434984 473 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 OR2AQ1P-201ENST00000451972 200 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 SNORA43.2-201ENST00000516652 128 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 SNORA70.18-201ENST00000516696 98 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC007458.1-201ENST00000542812 373 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 H3F3AP1-201ENST00000559984 334 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC090617.7-201ENST00000623952 126 ntBASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3RF2Q8TEC5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 CUL1P1-201ENST00000509510 2425 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNA5SP502-201ENST00000362694 119 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNA5SP50-201ENST00000363731 107 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 SNORA51.11-201ENST00000384442 131 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 PTMAP5-201ENST00000393073 333 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-847P-201ENST00000411115 108 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RAC1P3-201ENST00000416129 580 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 FTH1P6-201ENST00000430768 320 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AL591043.1-201ENST00000432461 424 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RPS6P12-201ENST00000432491 726 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AC079354.2-201ENST00000453523 154 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RN7SL93P-201ENST00000463035 293 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RPS4XP13-201ENST00000483219 789 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNU1-61P-201ENST00000516107 151 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-1271P-201ENST00000517049 105 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 NACAP3-201ENST00000552100 481 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AL110115.1-201ENST00000614396 364 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AL713922.2-201ENST00000619384 716 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 MTND5P7-201ENST00000413558 1798 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AC010733.2-201ENST00000589496 5702 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 AC032011.1-201ENST00000611703 1549 ntBASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF2Q8TEC5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 ZNF72P-201ENST00000425869 1908 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNU1-18P-201ENST00000363062 164 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNY3P11-201ENST00000364153 102 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 Z98749.2-208ENST00000381646 500 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNA5SP494-201ENST00000410653 129 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-1245P-201ENST00000411130 106 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 RNU7-175P-201ENST00000515915 61 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AC011602.1-201ENST00000546484 331 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AC104581.2-201ENST00000572227 430 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 AL390123.1-201ENST00000603216 237 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 U6.104-201ENST00000637979 90 ntBASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
SH3RF2Q8TEC5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF2Q8TEC5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SH3RF2Q8TEC5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF2Q8TEC5 RNU6-874P-201ENST00000362390 105 ntBASIC3.73□□□□□ -1.81
SH3RF2Q8TEC5 U3.13-201ENST00000364804 214 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms